| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0624 |
|---|
| Symbol | |
|---|
| ID | 4846571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 594969 |
|---|
| End bp | 595871 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640115306 |
|---|
| Product | CoB--CoM heterodisulfide reductase |
|---|
| Protein accession | YP_001046539 |
|---|
| Protein GI | 126178574 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2048] Heterodisulfide reductase, subunit B |
|---|
| TIGRFAM ID | [TIGR03288] CoB--CoM heterodisulfide reductase, subunit B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.022325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAA ACAACCACCA GTACGCATTC TTCCTCGGGT GCATCGCCCC GAACCGGTAC
CCCGGCATCG AGGCGGCGGC CATCCGGACC AGCAAGAACG TCGGCATCGA CCTCCTGCCC
CTGAAGGGCG CAAGCTGCTG CCCGGCACCG GGTGCGTTCG GTTCGATCGA CCTGAACATC
TGGTATGCGA TGGCAGCCAG AAACGTCGTC CTCGCTGAAC AGATGGGCAT GGACATCACC
CTGATCTGCA ACGGGTGCTA CAAGTCGATC TATGAAGTCA ACGAAAAACT GAAGCACAAC
GACGAACTCC GCGACGGAGT CAACGAGGTG CTCAAAGAGA TCGACATGGA GTTCAAGGGG
ACCATCGACG TCTGGCACCT CGCCGAGCTC TACTACGACC CCAAGATCGT GGGCGTCAAG
AAGATTGCAG AAAGCGTCAA GCGCCCCCTG ACCGGCGCGA AGATCGCCGT CCACTACGGC
TGCCACCTGA TGAAACCCGG CAAGGAACGG CACTTCGGCG ACACCGAGAA CCCGATGTGG
ATCGAAGAAC TCGTCGCCGC TCTCGGAGCC GAGCCCGTCC AGTACCGCAA CAAGATGCAG
TGCTGCGGTG CCGGCGGCGG TGTCCGTGGG TACGACCTGA CGCATGCGCT CGACATCACG
AACGAAAAAC TGATCAACCT GCAGGAAGTG GGCGCGGATG CGCTGACCGA GGTCTGTCCG
TTCTGCCAGC TCCAGTACGA CAGAGGACAG GTCGAGATCC AGGACAAGTT CGGCATCACC
TGGGGACTCC CGGTCCTGCA CTACAACGAA CTCCTGGGAC TGGCTCAGGG CATGAACCCG
GACGAGCTTG CACTCGACCT TCATGCCATC GATGTTGAGC CGTTCCTGAA GAAGATCCTG
TGA
|
|---|
| Protein sequence | MSGNNHQYAF FLGCIAPNRY PGIEAAAIRT SKNVGIDLLP LKGASCCPAP GAFGSIDLNI
WYAMAARNVV LAEQMGMDIT LICNGCYKSI YEVNEKLKHN DELRDGVNEV LKEIDMEFKG
TIDVWHLAEL YYDPKIVGVK KIAESVKRPL TGAKIAVHYG CHLMKPGKER HFGDTENPMW
IEELVAALGA EPVQYRNKMQ CCGAGGGVRG YDLTHALDIT NEKLINLQEV GADALTEVCP
FCQLQYDRGQ VEIQDKFGIT WGLPVLHYNE LLGLAQGMNP DELALDLHAI DVEPFLKKIL
|
|---|
| |