| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0587 |
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| Symbol | |
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| ID | 4848033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 560677 |
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| End bp | 562110 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640115269 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001046502 |
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| Protein GI | 126178537 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00173275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGATC TGCTGGATAG ATTTGAACCC ATCCTTGCAG CGATGCCTGC AGTCAGGGGG
CCGGAAGGGC ACGTCCACTT CAAGAATAAA CTCATGTGGA CGCTTGCCAT CCTGCTTCTC
TACTTCTCAT TGACCAACAT CGATATCTTT GGACTCTCTC CGCAGTCACA GGATCTTTTC
GGAATGTACC GTGCCCTGCT TGCCGGTGCG AGCGGTTCGC TCCTGCATCT CGGTATCGGG
CCGATCGTCA CCGCGTCGAT CGTGCTGCAG CTGCTCAAGG GTGCCGGACT CCTGCAGATC
GATACCAGCG AAGCACGCGG GCAGGTCATG TATATGGGCC TGCAGAAACT GCTCATCTTC
GTGATGATCA TCGTCGAAGC GTTCCCCATG GTCGCGAGCG GTATGATGCT GCCCGACCCG
TCGGTGGCAA CGCAATTCTT CGGCGGCAAT ATGCTCACGG TCTCGCTCCT GATCTTCCTC
CAGGTCTGCC TCGGCGGGCT TCTGGTGGTG CTGATGGACG AGGTCGTCAC GAAGTGGGGC
GTCGGTTCGG GTGTGGGGCT CTTCATCGTT GCGGGGGTCT CGCAGGGTCT CGTGAACGGG
TTCCTGAACT GGCAGACGGG CACCGATCCC TTCCCGATCG GGTTCTTCCC GCGGCTCTTC
GCCATAGGGA CCTCGGGAGC GAGTTTCCTC GAGTACTTCG GGACGGACCT GCTCGCCCTC
GTCACGACGA TCGCCATCTT CATGGTCATC GTCTACGTGG AGTCGACCCG TATCGAGATC
CCGCTCGCGC ATACCGCCGT CCGCGGCGCC CGTGCGCGGT TCCCGGTAAA GCTCATCTAT
GCGAGCGTTC TGCCGATGAT TCTCGTCCGG GTGCTGCAGG CGAACATCCA GATGATCGGG
ATGTTCCTCT CGAACGCCGG GATAAACATC TTCGGCGAGT TCCAGGGACA AATGCCGACG
AGCGGCCTGA TGTGGTATAT CGCGCCGATC AACGCCCCGC AGGACTGGAT GTGGTGGCTC
TCCGATCTCG GACACGCCCC CTGGGAGATC ATGTTGCGGA TGGGCATCGA TGTCACCGTT
ATGGTGGTCG GGGGCGCAAT CTTCGCGCTC TTCTGGGTCA AGACCGCCGG CCTCGACTCG
AAGGACGTGG CCCGGCAGAT CCAGAGAAGC GGGATGCAGA TCCCCGGCTA CCGGCGGAGT
GAGCAGGTGC TTGTGAAGTA CCTCGACCGC TACATCCCGC GGATCACCGT CATCGGCGGT
GTGTTCATCG GCCTTCTCTC GGTCGTCGCG AACCTCTTCG GTGTGATCGG TGCGGTCGGG
GGAACGGGTC TGCTGCTTGC GGTGAGTATC ACCTACCGCC TCTACGAGGA GGTCGCAAGC
CAGCAGATCA TGGAGATGTA CCCGTTCATG CGGTCGTTCT TTGGAAAGGA GTAA
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| Protein sequence | MGDLLDRFEP ILAAMPAVRG PEGHVHFKNK LMWTLAILLL YFSLTNIDIF GLSPQSQDLF
GMYRALLAGA SGSLLHLGIG PIVTASIVLQ LLKGAGLLQI DTSEARGQVM YMGLQKLLIF
VMIIVEAFPM VASGMMLPDP SVATQFFGGN MLTVSLLIFL QVCLGGLLVV LMDEVVTKWG
VGSGVGLFIV AGVSQGLVNG FLNWQTGTDP FPIGFFPRLF AIGTSGASFL EYFGTDLLAL
VTTIAIFMVI VYVESTRIEI PLAHTAVRGA RARFPVKLIY ASVLPMILVR VLQANIQMIG
MFLSNAGINI FGEFQGQMPT SGLMWYIAPI NAPQDWMWWL SDLGHAPWEI MLRMGIDVTV
MVVGGAIFAL FWVKTAGLDS KDVARQIQRS GMQIPGYRRS EQVLVKYLDR YIPRITVIGG
VFIGLLSVVA NLFGVIGAVG GTGLLLAVSI TYRLYEEVAS QQIMEMYPFM RSFFGKE
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