Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0564 |
Symbol | rpl3p |
ID | 4846962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 549452 |
End bp | 550465 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640115246 |
Product | 50S ribosomal protein L3P |
Protein accession | YP_001046479 |
Protein GI | 126178514 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.415651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAGA TAAACAGACC ACGCAGAGGA TCCCTCGCAT ACAGCCCGAG AAAACGGGCA AAAAGCCCGG TTCCGCGCTA CGGCTCATGG CCGGAGTACA CGGGAGCCCC GGCCGTGCAG GGATTCGCAG GGTACAAGGT GGGAATGACC CACGTCATCA TGGTCGATGA CCACAAGAGC AGCCCCACCG AAGGCAAGGA CGTGATGGTG CCGGTGACCG TGGTTGAGGT TCCGCCCATG CGGGTGGCCG GCGTGCGCGC ATACGGTGAA GATACCTACG GAAAGCACGC GCTGACCGAA GCGTGGACGA CCGATCTCGA CGAGGAATTG TCCCGCCGGA TCAACGTCCC GAAGAACCAC GACACCGCCG CTGCCCTCGA AGCCGTCAAG GCTGCCGTCG GCGAAGGCAA GGTCTCGGAA CTCTACGCTC TGGCCTACAC CCGGCCGATG GAGCTCACCG GCGTCCCGAA GAAGGTCCCC GACCTGATGG AGATGCGGAT CGCCGGCGGA AGCCTCGAAG ACCAGATCGC CTACGCTGCC GAGATCCTCG GAAAGGAGAT CACGATCTCC GGGAACCTCG AGGTCGGCGA GTACGTCGAC GTGACCGCCG TCACCACCGG TAAGGGCACG GAAGGTCCCG TCAAGCGGTG GGGCGTCCAG GTCCGGAAGC GGAAACATTC CCGCGGCGGC AAGAAACGGC ACATCGGCAA CCTCGGTCCC TGGCATCCGC ACCACGTCAG GTGGCAGGTG CCCCAGATGG GCCAGATGGG TTACCAGCAG CGCACCGAGT TCAACAAGCG GATCTTAAAG ATCGGCGCCG ACGGCGACGA GATAACGCCG GCAGGCGGGT TCCTGCACTA CGGTCTCGTG CGCGGGCCCT ACGTGCTGAT CAAGGGTTCC GTCCCGGGGC CGAACAAGCG GCTGGTCCGG ATACGGTCCG CGATACGGCA GGGTGAACAC ACCGTTCGCA CGCCGGCGAT CAATTTCGTC AGCGTGCAGA GCCAGCAGGG GTGA
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Protein sequence | MPKINRPRRG SLAYSPRKRA KSPVPRYGSW PEYTGAPAVQ GFAGYKVGMT HVIMVDDHKS SPTEGKDVMV PVTVVEVPPM RVAGVRAYGE DTYGKHALTE AWTTDLDEEL SRRINVPKNH DTAAALEAVK AAVGEGKVSE LYALAYTRPM ELTGVPKKVP DLMEMRIAGG SLEDQIAYAA EILGKEITIS GNLEVGEYVD VTAVTTGKGT EGPVKRWGVQ VRKRKHSRGG KKRHIGNLGP WHPHHVRWQV PQMGQMGYQQ RTEFNKRILK IGADGDEITP AGGFLHYGLV RGPYVLIKGS VPGPNKRLVR IRSAIRQGEH TVRTPAINFV SVQSQQG
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