Gene Memar_0493 details

Gene Information

• Locus tag: Memar_0493
• ID: 4846216
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 479922
• End bp: 480596
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640115172
• Product: ABC transporter-related protein
• Protein accession: YP_001046408
• Protein GI: 126178443
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.352505
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGGCG AGCCTATCCT CCGGTTCGAG GAGGTCAGCA AGATCTACCC CCTCCCGGCA 
GGCGACGTCG TGGCGCTCGA TCGCGTCTCC CTCACCGTCG ATCCGGGCGA GTTCATCGCC 
GTTATGGGGC CCTCGGGCTC CGGGAAGTCG ACGCTCCTGA ACCTGATGGG CTGTCTCGAC 
GTCCCGACCC GCGGGAAGAT CTACCTATCC GGGCATGAGA TCTCCAGGAT GAGCGACGAC 
GACCTCACCC GGCTCCGGCG CGACCGCATC GGGTTCGTCT TCCAGCAGTT CAATCTCATC 
CCGCTGCTCT CGGCGGTCGA GAACGTCGAG TTTCCCATCA TCCTCACCAC CGACCGGGAG 
GAGAGCCGGC GCCGGGCGAT CGAGGTCATG CGGGCGATGC ACCTCAACGA CGCCCTCTTG 
ACCCACAGGC CGGCCGAGCT CTCGGGCGGC GAGCAGCAAC GGGTCGCCAT CGCCCGCGCG 
CTCGTGAACG ACCCCGACCT CCTTCTCTGC GACGAGCCGA CCGGGAACCT GGACACGAAG 
ACCGGGACGG CGATCATGGA GATTCTTGCG GAGGAGAACC GGGAGGGCAA GACGGTCATC 
ATGGTCACTC ACGACCCCAA CGTCGCCGCA TACGCCCGCC GCACGATCCG GATCGTGGAC 
GGGAGGCTGG CATAG 

 

Protein sequence

MSGEPILRFE EVSKIYPLPA GDVVALDRVS LTVDPGEFIA VMGPSGSGKS TLLNLMGCLD 
VPTRGKIYLS GHEISRMSDD DLTRLRRDRI GFVFQQFNLI PLLSAVENVE FPIILTTDRE 
ESRRRAIEVM RAMHLNDALL THRPAELSGG EQQRVAIARA LVNDPDLLLC DEPTGNLDTK 
TGTAIMEILA EENREGKTVI MVTHDPNVAA YARRTIRIVD GRLA