Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0487 |
Symbol | |
ID | 4848242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 472983 |
End bp | 473774 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640115166 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001046402 |
Protein GI | 126178437 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.194536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCTC CCCGGGACGT TCCGAACGCC CTCCTTGAAT CTCTTAAATC ACTGGGACTT ACGAAGTACG AAGCCCTTGT ATATATCGGG CTCCTCAGAA CCTCGGGCGC GACTGCAACG GAGGTTCACG AGATCTCCGG CGTGCCGCGC GCATCCGTCT ACCCGGTTCT CGACCGGCTC GTCCAGAAGG AGCTGGTCAG CGTCTCGCAC ACGACGCCCA AACGCTTCGA CGCCGTTGCC CCCGACCAGG GCGTCGAGAA CCTGATGCGC CGGATCGAGA GCGACGCTGA GAGCGCCCGG GCGGCCCTCG ACGTCTTTTA CCGGGAGAAG GGGCTGGAAG GCCGGGGCGA CCGGGAACTG GTCTGGACGA TCTACGGCGA AGAGAACATC AGAACCCGCC TCGCCGGCAT GTTCGGGAGC GCGGAGCGGA GCGTGGAGGT GCTGGCGACG TGGGACATTC TCCAGGGGGG CGTGCTCCCG CTGCTTGAAT CCGCTCCCGA CTCCGTGCCG GTCGATATCG TCACCGAGCG CTGGGAAGGC GAGCAGCCTT CCCGGTTCCG GCTCCACCTC CTTCCCCTCG CCGGGCTGCG CGAGACCCGT CTCCCGACGG AGAACCTGCT GCCGTACGAG CGGTCGGGCG TCTTCCTGGT GGACGACTCC CGTGCGCTGC TCTGGATGGG TGCGGTCGAC GGGCAGCCGT CCGCCCTCTA CTCCGAATCC GAGGGGCTCG TCCTGTTTGT GCGGCGGCAT ATCACCACCG TCACGGAGTG GGCGAAGGCT GCGGTTCAGT AA
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Protein sequence | MKAPRDVPNA LLESLKSLGL TKYEALVYIG LLRTSGATAT EVHEISGVPR ASVYPVLDRL VQKELVSVSH TTPKRFDAVA PDQGVENLMR RIESDAESAR AALDVFYREK GLEGRGDREL VWTIYGEENI RTRLAGMFGS AERSVEVLAT WDILQGGVLP LLESAPDSVP VDIVTERWEG EQPSRFRLHL LPLAGLRETR LPTENLLPYE RSGVFLVDDS RALLWMGAVD GQPSALYSES EGLVLFVRRH ITTVTEWAKA AVQ
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