Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0420 |
Symbol | |
ID | 4845976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 404597 |
End bp | 406606 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640115095 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001046335 |
Protein GI | 126178370 |
COG category | [R] General function prediction only |
COG ID | [COG1202] Superfamily II helicase, archaea-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCA TCGTCCAGCC CCAGAAGGGC ACGTATAAAC TGTTGTTCGT TGAAGGCGGC CGTGTCGAAG GTTCGGGGTT CGTCGACCTG GCTGCGACCC CGAAGGGCCG GCGGCCGAAG AACTTCAAGA TGCGCCGGCG CGGCAAACAG CTCAAGCCAA CCCCGACCCG GGACCTGATC ACGCTGTTGC GCCGGTCATC TGTTCTCCTT GCGGCGAAGA GCCCTGAGTT CGAGTCGTTC CTTGCCGATC TTCAGATCCC GTCATCGAGG ATCGACATCT GCCGGTTCTG CCAGCTCGAG GACCGGTTCG CGCCGGTCGA CAAGGCGACC GGCGTCCGGT ACGGCGGGGA GTGGATCTGC ATGGAGTGCG CAAAGCGCGA GATGCGCCGC GAGCTCGGTT ACCTGGGGAA GTTCGGCGGC TCGGTGCTTG TTCATCTTGA GAAACTCCTC GCCCAGATCC GGGACCTCGA CCGGGTGCTG GCGTCGGTGG GGCCCGATCA CCCCGACCGG AAGCGAACGC TCTTTGACCG GCTCGAGGCG CACGAGGTTC AGAAAACCGC CCATATCACC GATCTTCCGC TCCCTCCCGC GTTTGCAAAG GCAGCCGGGG TCGAGTACCT GATGCCCGTC CAGCAGCTCG CCGTTCAGAA CGGCCTCCTC GAGGGGCAGC ACCTCCTGGT CGTCTCGGCG ACCGCGAGCG GCAAGACCTT CATCGGGGAG ATGGCCGGGA TGAAGAATTT CCTCGAAGGC CGGGGGAGGA CGCTCTTCCT GGTTCCGCTG GTCGCGCTCG CGAACCAGAA GTACCAGCGG TTCCGCGACC GCTACGGTCA CCTGGTCCGG GTCACCCTGC AGACCGGGGT GAGCCGTCTC AACCTCCCCG AGACCCGTCC GGCGGGCGAC CGGGACGTCA ACGCTCCCGT GGTGGTGGGG ACTTACGAGG GGATCGACCA CGCTCTCCGG ACCGGGCGAT CCGTAAAAGA CATCGGCACC GTCGTCATCG ACGAGGTGCA GATGCTCGAG GATCCGGAAC GCGGCCACCG TCTCGACGGG CTGATCGCCC GGCTCAAGCA CATCGCGCCC GAGGCGCAGT TCCTCTACCT CTCGGCCACG ATCGGGGCTC CGGGACTGCT CGCGGAGAAA CTCCGGGCAA ACCTTGTCCG CTACGCGGAC CGGCCGGTTC CGCTCGAACG CCACCTCATC TTCATCGAGC GAAACAAGAA GATCGGGTTC ATCAAGCAGA TGGCCGCCGA GGAATACAAA GTACGGTCGT CGAAGGGCTA CCGGGGCCAG ACGATCGTCT TCACGAACTC CCGGGCCCGC TGTCATGTCA TTGCCGACGC CCTTGGAACC AAGGCCGCTC CCTATCACGC GGGGCTGACC TCCCAGGAAC GCCGGGACGT GGAGCGGCGG TTCACGAACG GGGAGATCTC TGCTGTCGTG ACCACGGCGG CGCTTGCCGC AGGCGTCGAT TTCCCGGCGT CCCAGGTGAT CTTCGATGCG CTTGCGATGG GCATTCAGTG GCTCACCGTC CAGGAGTTCC ACCAGATGAT GGGCCGGGCG GGGCGGCCGG ATTTCCACGA CCTCGGCCGG GTGGTCATCC TGGCGGAGCC CGGCGGATCC TATTCCCGGA CGTCCGGCAA GACCGAGGAA GAGGTCGCCG TCGGCCTCCT GCGAGGCGAG ATGGAGGAGG TCGCGCCCGA GTACGACATG GAGCAGAGTA CGGAGGAGTT CGTCGCGAAC GCCGTGGTCT CGAACGGCGA CGAGCAGCAG GTCATCAAGA TGAACCGGAC GATGGTCGGG ACGCTGGAGC CCGCCCTCCC CACGCTCCTC GACTACGGGC TGGTCCGGCG GCGGGGTGGG CGTATCGAAC TCACCGATAT GGCCCGGGTG ATGGCCGAAC ATTTCATCGG CGCCGAGCGG TTGATGGAGA TCATGGATCT CGTCCGACGC ATGGACGATG CGGCCGAAGT CGTCGCGGAA CTCGAGTGCG CCGAGGAGAA GACGCCGTAG
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Protein sequence | MKVIVQPQKG TYKLLFVEGG RVEGSGFVDL AATPKGRRPK NFKMRRRGKQ LKPTPTRDLI TLLRRSSVLL AAKSPEFESF LADLQIPSSR IDICRFCQLE DRFAPVDKAT GVRYGGEWIC MECAKREMRR ELGYLGKFGG SVLVHLEKLL AQIRDLDRVL ASVGPDHPDR KRTLFDRLEA HEVQKTAHIT DLPLPPAFAK AAGVEYLMPV QQLAVQNGLL EGQHLLVVSA TASGKTFIGE MAGMKNFLEG RGRTLFLVPL VALANQKYQR FRDRYGHLVR VTLQTGVSRL NLPETRPAGD RDVNAPVVVG TYEGIDHALR TGRSVKDIGT VVIDEVQMLE DPERGHRLDG LIARLKHIAP EAQFLYLSAT IGAPGLLAEK LRANLVRYAD RPVPLERHLI FIERNKKIGF IKQMAAEEYK VRSSKGYRGQ TIVFTNSRAR CHVIADALGT KAAPYHAGLT SQERRDVERR FTNGEISAVV TTAALAAGVD FPASQVIFDA LAMGIQWLTV QEFHQMMGRA GRPDFHDLGR VVILAEPGGS YSRTSGKTEE EVAVGLLRGE MEEVAPEYDM EQSTEEFVAN AVVSNGDEQQ VIKMNRTMVG TLEPALPTLL DYGLVRRRGG RIELTDMARV MAEHFIGAER LMEIMDLVRR MDDAAEVVAE LECAEEKTP
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