Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0395 |
Symbol | |
ID | 4847912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 377431 |
End bp | 378318 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640115069 |
Product | ABC transporter-related protein |
Protein accession | YP_001046310 |
Protein GI | 126178345 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACGG CCCGCTCTCT CGTCAAGCAT TACGGCGACT TCCCGGCCCT CGACGACGTC ACGTTCGACC TCGACGATGC ACGGATACTC GGGGTGATCG GGCATAACGG CGCCGGCAAG ACGACGCTCT TGAAGATCAT GGCTGGTCTT ATCGCGCCGA CGGCAGGCAG TCTCGTCGTC GACGGGATCG ACGTCACGAG AAGGCCGCTC GACCTGAAAC GGAACCTGGG GTACCTCCCC GAAGAGTCGC GTCTCTACGA GACGATGACC ACGGATGCGT ATCTCGCGTT CTTCGGCGAG ATCTACGGCC TGTCGAAGCC GGTCATCCGC GAGCGGCGCG ACGTGCTCCT CGATTCGCTC GCGCTCGAGG CGGACGGGAA AAAGATCGGG GAACTCTCGA AGGGGATGAA GCGGAAGGTC GCGATCGCGC GGTCGCTGAT GCACGATCCC GATCTCCTCA TCTACGACGA GCCCACCTCC GGCCTCGACC CCATGACCTC GCGGTCGGTG CTCGATTACG TCAAAAGTCT GCGCGAACGG GGCAAGACGG TGATCTTCTC CGCCCACAAC CTCTTCCAGG TGGAGGAAGC CTGCGACCTC GTCCTGATCC TGCGCCGGGG GAAGGTGGTG GCGAACGGCA CCATGCCCGA ACTCCGGGAG ACCTTCGGTT CGCTCACCTA CCAGGTCTTC TTCCGGATTC CCGATCCTGC GGCGTTCGCG ACGTCGGTCG GCTACTCGGC CTCCGATGGC CGGTACCTTG CCGAGGCGCG TTCCGTCGAG GAACTGAACC GGACAACCGC GGCTCTTGCG GCCGACGGCG CGACGATCGA GCGGATCGAG TCGCATTACC CGACGCTCGA GGAGATGCTC CTGAAGATCG GGCGGTAA
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Protein sequence | MITARSLVKH YGDFPALDDV TFDLDDARIL GVIGHNGAGK TTLLKIMAGL IAPTAGSLVV DGIDVTRRPL DLKRNLGYLP EESRLYETMT TDAYLAFFGE IYGLSKPVIR ERRDVLLDSL ALEADGKKIG ELSKGMKRKV AIARSLMHDP DLLIYDEPTS GLDPMTSRSV LDYVKSLRER GKTVIFSAHN LFQVEEACDL VLILRRGKVV ANGTMPELRE TFGSLTYQVF FRIPDPAAFA TSVGYSASDG RYLAEARSVE ELNRTTAALA ADGATIERIE SHYPTLEEML LKIGR
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