| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0386 |
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| Symbol | |
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| ID | 4846354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 365117 |
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| End bp | 366598 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640115060 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001046301 |
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| Protein GI | 126178336 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCC ATACCCCACG CCACCCCGCC CTCTACGAGG TCAACGCCCG CGTCCTGCTC
CGCCACCTCG GCAGAGAGGC CGGGCGCCGC CTCACGCTCG ACGACATCCC CGATTCCCGG
CTCGCGGAAC TGGCCGGGTG CGGCTTCTCC TGGGTCTACC TCATGGGAGC CTGGGAGACC
GGGGAGGCCG GGCGCCGGGT CTCCCGCTCG AACGAGCAAT GGCTCGCCGG GTACCGGTGT
CTGCTCCCCG ATCTTAGCGA GGAGGATATC TGCGGCTCCC CCTTTGCCGT TGCCGGCTAT
TTCCTCCACC CCGACCTCGG GGAGCCGGAG GCACTCCCCC GGTTCCGCGA GCGCCTGCAC
CGGTACGGGA TCCGCCTGAT GCTCGACTTC GTCCCGAACC ACACCGCACC CGACCACCCC
TGGGTGCAGG ATCGCCCGGA CTACTACGTT CACGGCACGG AGGAGGAACT CGCCCGCCGA
CCGCAGGAGT TCGTCCGGGT GAACCTTCCC GGCGGCCCGG CCGTCCTCGC CCACGGCCGG
GACCCCTACT CCGGCGGCTG GCCCGACACC CTGCAGCTCG ATTACGGCAA TCCGGCCATG
CAGGAGGCAA TGACCGCCGA ACTGCGGAGG GTCGCGGGGC AGTGCGACGG CCTCCGGTGC
GACATGGCGA TGCTCGTCCT CCCGGAGATC TTCCGGCGGA CCTGGGGGCG GGAGACGGAA
CCCTTCTGGC CCCGCGCAAT CGAAGGCGTC CACAAAGAGC ACCCGGGGTT TACCTTTGTG
GCGGAGGTTT ACTGGGACCT CGAGTGGACG CTCCAGCAGC AGGGATTCGA CTACACCTAC
GACAAGCGCC TCTACGACCG GCTCCGAAAC GGGGCAGCCC GGCCGGTGCG GGAGCATTTT
TGGGCGGATC CTGAATACCA GAAAAGATCC GTCAGGTTCC TCGAGAACCA CGACGAGAAC
CGGGCGGCGG CGGTCTTCCC GCCCGACCGC CACCGGGCAG CCGCCGTCCT CGCCTTCCTC
TGCCCGGGTC TTCGGTTCAT TCACCGGGGG CAGGTTTCCG GGCGGCACAA GAAGGTCTCC
GTCCACCTCT GCCGGGGCCC GGAGGAGCCG GCCGACCCGG CCATAGAAGA GTTCTACCGG
CGGCTTTTTG CCTGCCTGCG CCTGCCGGCG TTCCGGGACG GAGAGTGGCG GCTCCTCGAC
TGCACCCCCG CATGGGAGGG GAACCCCTCC CACGACGGAT ATGTCGCCTT CGCCTGGGAG
AGGGAGGAGC AGCGCTTCCT CGTCGCCGTC AACTACGCCC CCGACCGGGG CCAGTGTTAC
GTCCCGCTCC CCTGGGCGGA CCTCACGGGG AAGGCGGTCC GGCTCCGCGA TCTCATCGGG
GAGGCACGGT ATGACCGGGA CGGCGAGGGG CTCCTCTCTC CCGGACTCTA CCTGGACCTC
CCCGGGTGGG GCCGCCACGT CTTCGAGGTC GCGGGAGAGT GA
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| Protein sequence | MNTHTPRHPA LYEVNARVLL RHLGREAGRR LTLDDIPDSR LAELAGCGFS WVYLMGAWET
GEAGRRVSRS NEQWLAGYRC LLPDLSEEDI CGSPFAVAGY FLHPDLGEPE ALPRFRERLH
RYGIRLMLDF VPNHTAPDHP WVQDRPDYYV HGTEEELARR PQEFVRVNLP GGPAVLAHGR
DPYSGGWPDT LQLDYGNPAM QEAMTAELRR VAGQCDGLRC DMAMLVLPEI FRRTWGRETE
PFWPRAIEGV HKEHPGFTFV AEVYWDLEWT LQQQGFDYTY DKRLYDRLRN GAARPVREHF
WADPEYQKRS VRFLENHDEN RAAAVFPPDR HRAAAVLAFL CPGLRFIHRG QVSGRHKKVS
VHLCRGPEEP ADPAIEEFYR RLFACLRLPA FRDGEWRLLD CTPAWEGNPS HDGYVAFAWE
REEQRFLVAV NYAPDRGQCY VPLPWADLTG KAVRLRDLIG EARYDRDGEG LLSPGLYLDL
PGWGRHVFEV AGE
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