Gene Memar_0353 details

Gene Information

• Locus tag: Memar_0353
• ID: 4845898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 330817
• End bp: 332724
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640115027
• Product: hypothetical protein
• Protein accession: YP_001046268
• Protein GI: 126178303
• COG category: [R] General function prediction only
• COG ID: [COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.116012
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGAACC GAAACGCGGT GCTGGTGGCC GTCCTCGGGT GTCTCGTGAT CGCCGCGATC 
ATCGGGACCG CCCTCGCGTC GGAGGGCGGC GGGGAGGAGA CCCAGGGAGA TTTGCTGAAG 
TTTTCGTCGA AAGAAGAGAT CGAAGCGTTC TTGAAGGAAC ACGCGCAGGG AGTGAGGAGC 
GGTAACGGCT ACCCCTGGAT GACGGGGACC GGCAGACAGG AGACCGCCAT GGACGCGCCT 
GCACCGACGA GTGCGCCGCC CGCCCCGTCG GCCGCACGCG ACTACTCGAC CACGAACGTG 
CAGGTAGAGG GTGTCGATGA GGCCGACTTC CTGAAGAACG ACGGAAGATA CATCTACGTC 
ATATCGGGCG AGACACTTGC GATCCTCGAA GCGTTCCCGG CAGAGGATGC CAGAATCGTC 
TCCGAAACCC GGATCGAAGG ATTCCCGACG GCGCTCTTCC TTGCAGGCGA CCGCCTGACG 
ATCTTTGCCA CCGGAACGGA AGAGATAATG ACCACCGTGA AAGGGAGTGT AACACCCGTC 
CCCGTCCAGC GGGCGGTGAC GCACGCCTAC ATCTACGACA TCGGCGATCG GAGCGATCCC 
GAACTGGTCC GGACCCGGAC CTTCACCGGC AGTTACTACG ACGCCCGGAT GATCAGGGAC 
AACGTCTACG TCGTCACGCG GGAGGCTCCC GTCTGGATAC GGGACGAGAT CGTCCTCCCC 
GAGGTGCGGA CGGACAGCGG CGAGCCCATC CTGCCTGACG TCTATCGCCC CGGGACTCCG 
CTGCAGAACT ACGTCTTCTA CACCGCAAGC GCCTTCTCCG TCAAAAACGA CAGGGTCAGT 
CCCGACGCCG AGACGTTCCT CCTCGGTTAC GACACCACCC TCTTTGCGTC GCAGAAGAAC 
CTCTACATCG GCTACCGCCA CATGGGAACC CCCCGAACGG CGCCCGACTA CACCGGCAGC 
CGGGAGGAGA CGATCGTCCA CCGGTTCGCG ATCGACGACG GAAGGATCGA GTATGAGGCC 
ATGGGCAGGG TTCCCGGACA CCTCTTGAAC CAGTTCTCGC TCGACGAGTA CGGGGAGAAC 
CTCCGGGTTG CGACGACCGT CGAGGGCTGG ACGCGTGAGG GGTCGGTCCA GTACAACAAC 
GTCTACGTTC TCGACCCCGC AATGGATGTC ATCGGGACGC TCGAACACAT CGCGCCGGAC 
GAGCGGATCT ACGCCGCCCG GTTCGTCGGC GACCGGCTGT ATCTCGTGAC GTTCAAGCGG 
ATCGATCCCC TCTTCGTCAT CGATCTCTCG GACCCGAAAC ACCCCGGCAT CCTCGGGAAA 
CTCAAGATCC CCGGCTACTC CGATTACCTC CACCCCTATG ACGGCGACCA CATCGTCGGC 
ATCGGCAAAG AGACGAGCGA GAACGATTGG GGCGGTGTCT CGGTGGAGGG GCTCAAGATC 
GCGCTCTTCG ACGTCTCGGA CGTGAATAAC CCGATCCTGA TCCACGACGT CGTGATCGGG 
GAGCCCGGAA CCGACTCGGA GGCTCTCCGC GACCACAAGG CCTTCCTCTT TGTGAAAGAG 
AAGGACCTCC TCGTCATCCC GGTGAGCGAG ATAAAACGGG TGGAGAACTC CGAATCGAAG 
TACCCCGGCT CCTACGGCAC CGCGGCCTGG CAGGGGGCTT ACGTATACCG GGTGAACCCG 
GCAGAAGGGT TCGTCCTGCA GGGCACGGTC GCCCACGCGG AGAAAGGTTC CCCATACACC 
TGGGACTCGC CCGACGCCGT GCGGCGATCG CTCTTCATGG ACGACACCCT CTACACCGTC 
TCGGCAAGAA GCATCGTCAT GACCGATCTT GCCGACGGCA GCCGGGTGAA CGAGGTCTTC 
CTCCCCTACC GGTGGGGGGC CTCCCCGACC CCTGTCCCGG TCCGGTGA 

 

Protein sequence

MWNRNAVLVA VLGCLVIAAI IGTALASEGG GEETQGDLLK FSSKEEIEAF LKEHAQGVRS 
GNGYPWMTGT GRQETAMDAP APTSAPPAPS AARDYSTTNV QVEGVDEADF LKNDGRYIYV 
ISGETLAILE AFPAEDARIV SETRIEGFPT ALFLAGDRLT IFATGTEEIM TTVKGSVTPV 
PVQRAVTHAY IYDIGDRSDP ELVRTRTFTG SYYDARMIRD NVYVVTREAP VWIRDEIVLP 
EVRTDSGEPI LPDVYRPGTP LQNYVFYTAS AFSVKNDRVS PDAETFLLGY DTTLFASQKN 
LYIGYRHMGT PRTAPDYTGS REETIVHRFA IDDGRIEYEA MGRVPGHLLN QFSLDEYGEN 
LRVATTVEGW TREGSVQYNN VYVLDPAMDV IGTLEHIAPD ERIYAARFVG DRLYLVTFKR 
IDPLFVIDLS DPKHPGILGK LKIPGYSDYL HPYDGDHIVG IGKETSENDW GGVSVEGLKI 
ALFDVSDVNN PILIHDVVIG EPGTDSEALR DHKAFLFVKE KDLLVIPVSE IKRVENSESK 
YPGSYGTAAW QGAYVYRVNP AEGFVLQGTV AHAEKGSPYT WDSPDAVRRS LFMDDTLYTV 
SARSIVMTDL ADGSRVNEVF LPYRWGASPT PVPVR