| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0323 |
|---|
| Symbol | |
|---|
| ID | 4846256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 303935 |
|---|
| End bp | 305308 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114997 |
|---|
| Product | tRNA CCA-pyrophosphorylase |
|---|
| Protein accession | YP_001046238 |
|---|
| Protein GI | 126178273 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
|---|
| TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCCGGT GCCCCTGCGA GGAAGAGGTG CTCAACAGGA TCCGCCCCAC GCCAGAAGAG
CGGACCTACG TCCGTACGAT GGGACAGCAA CTGATCGAGG CGGTGGAGCG TTCGGGAAAG
GCGAAGGCGA TGATGGTGGG CTCGGTCGCC CGCGACACCT TCGTCCGCGG CGACCGGGAT
CTCGATATAT TCATGCTCTT CGATCCCGCT CTCTCCCGGG AGGAACTGCA GGAGCAGGGT
CTGTCCCTCG CGCACCGGAT CGCGGAGGAG TTCGGTGCGA CCTGGCGCGA GAAGTACGCG
GAGCACCCTT ACGTCAACGC GACGATCGAT TCGCTGGACA TCGATCTCGT CCCCTGCTAC
GCCGTCGCGA GCGCCACCGA GATCAAGAGC GCCGTGGACC GGACGCCGTT TCACACCCGC
TATATCCTCG GCCACATCGG CGGCTACGCC GACGACGTCC TCCTCTTCAA ACAGTTCGCG
AAGTCGGGCG GGGTCTACGG CTCGGATCAC ATGACCGAAG GGTTCTCCGG CTACCTCTGC
GAGATCCTGA CGATCCACTA CGGGGGGTTC CACCCGCTTC TTCGCGCCGC CGCCTGCTGG
AAGCCCGGAG AGGTGATCGA CATCGAGAGA CACGGGACGA AGGAGTTCGA GGATCCGCTC
GTCGTCATCG ATCCGGTCGA CCCGGAAAGA AACGTGGCGG CGGCGCTCTC GCTCTCGCGG
ATGTTCGAGT TCGTGGAACT CGCCCGCGGC TACCTCGCCG AGCCGTCGGA AGCGTTCTTC
TGCCGGCCCC CCTCCCCGCC GCTCACCCGG GAGATCTTCG CCCGCCTCCT CTCCGCGCGG
GGGACGCATC TCTTCTCCAT CGCGTTTGCA ACGCCGGAAT ACACCCCCGA TACGGTGGTC
CCCCAGCTCA GGAAATCCGC CGAATCGATC CGGGAACTCC TGGAGCGGAG CGGTTTTCCG
GTCAACCGCA TCGACGTCTG CATGGGAAAA GAGCGGTGCA TGCTCCTCTT CGAGCTGATG
GCCGATACCG TCCCGGTGGT GCGCCGGCAT ATCGGCCCGC CGCTCTCGAC ACGGGAGAAC
GCCGAGAAGT TCCTCGCGAA GTATGTCCGG GAAGAGGTCT TCGCCGGCCC CTACGTGGAG
GACGGCCGCT ACGTGGTGGA AGTCCCTCGC ACGTTCACCC GGGCCGTCGA CCTGCTGCGG
TCGAAGACGC TCTTAGACGT GGCGCTCGGC AAGCACGTCC GCCGCTCGAT GAAGCAGGGC
TGGACGGTGA AGGCCGGTGC TGAGTGCTGG GACGAGGAGT TTGCCGTCTT CGTCTCCAGG
TTCCTCGACC GGGCATCGCC GGTTGTGAGG ATCAAGAGGC TGACGGGGAA GTAA
|
|---|
| Protein sequence | MTRCPCEEEV LNRIRPTPEE RTYVRTMGQQ LIEAVERSGK AKAMMVGSVA RDTFVRGDRD
LDIFMLFDPA LSREELQEQG LSLAHRIAEE FGATWREKYA EHPYVNATID SLDIDLVPCY
AVASATEIKS AVDRTPFHTR YILGHIGGYA DDVLLFKQFA KSGGVYGSDH MTEGFSGYLC
EILTIHYGGF HPLLRAAACW KPGEVIDIER HGTKEFEDPL VVIDPVDPER NVAAALSLSR
MFEFVELARG YLAEPSEAFF CRPPSPPLTR EIFARLLSAR GTHLFSIAFA TPEYTPDTVV
PQLRKSAESI RELLERSGFP VNRIDVCMGK ERCMLLFELM ADTVPVVRRH IGPPLSTREN
AEKFLAKYVR EEVFAGPYVE DGRYVVEVPR TFTRAVDLLR SKTLLDVALG KHVRRSMKQG
WTVKAGAECW DEEFAVFVSR FLDRASPVVR IKRLTGK
|
|---|
| |