| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0314 |
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| Symbol | |
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| ID | 4848049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 293193 |
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| End bp | 295841 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640114988 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001046229 |
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| Protein GI | 126178264 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.53282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTC CAAAACGTGT TGGAAGGATC GAGTTCGGGC TCTTCTCCCC GAAGGAGATC
CGCAAGATGA GCGTCCGGAA GATCATCTGG GCGGACACCT ATGACGACGA CGGGTTTCCC
TACCCGCAGG GCCTGATGGA CCTGAACCTG GGCGTCATCG ACCCCGGTCT CCGGTGCAAG
ACCTGCGACC AGAAAGCGGC CGATTGTCCG GGCCACTTCG GGCACATCGA ACTCGCGAAG
CCCGTCATCC ACGTCGGCTA CACCCGGCTG ATCCGGAAAC TCCTGCGGGT GACCTGCAGG
TCGTGCTCCC GGCTGCTGAT GACGTCCGAA GAGGTCGAGA AGATCATCGG ACCCGAGGAC
AGCGAACTCG CGGGCGAGAT CGTCTCCGAG AAAGACATCA AGAAAGAACG GGTCTGCCCC
CACTGCGGGG AGCAGCAGCT CAAGATCAAC TTCGAGAAAC CCACCACCTT CTCCGAGGTC
TTCGTGGAAG ACGGGAGAAA GGTCGAGCAC AAGCTGACCC CGGCCGATAT CCGGGCACGC
CTCGAGCGGA TCCCGGACGA CGATCTCCGG GCTCTCGGGG TCAACCCGGA CGTCGCGCGC
CCTGAGTGGA CGATCCTCAC TGTTCTCCCG GTCCCGCCGG TCACGATGCG GCCCTCGATC
ATTCTCGAGA ACGGGCAGCG GTCCGAGGAT GACCTGACCC ACAAGCTCGT GGACATCATC
AGGATCAACC AGCGGTTCAA GGAGAACCAG GACGCCGGTG CACCCCAGCT GATCATCGAG
GATCTCTGGG AACTCCTGCA GTATCACGTC ACCACCTACC TCGACAACGA GGTGGCGGGG
TGCCCGCCTG CCCGGCACCG GAGCGGTCGG CCCTTAAAGA CCCTGTCGCA GCGTCTCAAG
GGGAAGGAAG GACGGTTCCG CGGCTCGCTT TCGGGCAAGC GTGTGAACTT CTCCGCTCGT
ACGGTCATCT CTCCCGATCC GAACCTCTCG ATCGGCGAGG TGGGGATACC GCTCGCCATT
GCAAACGAGA TGACGCTTCC GATAAGGGTG ACCACGTTCA ACATCGAAGA GATGAGGCAG
TATGTCCTGA ACGGCCCCGA ACGCCCCACC ATCCGGTCAC CCTGCGGCGC AAACTACGCT
ATTCGGCCGG ACAACAGGAG GATGCGTCTT TCGGACGCGA ACCTGGAGAC GGTCGCGGAG
ATGATCGAGC CGGGCTGGAC GGTGGAGCGG CAGTTAAAGG ATAACGATAT CGTTCTCTTC
AACCGGCAGC CCTCGCTGCA CCGGATGAGC ATCATGGCCC ACCGGGTCGT CGTGATGGAC
GGAAAGACGT TCCGGCTGAA CCCGGCTGTC TGCCCCCCCT ACAACGCCGA CTTCGACGGC
GACGAGATGA ACCTGCATAT CCCGCAGACC GAGGAGGCGC GGGCCGAGGC CGAGATCCTG
GTCTCGGTGT CGTCGAACAT CCTATCGCCG AGGACCGGCG GCCCGATCAT CGGGGGTATT
CACGACCACA TCTCGGGTAT CTTTCTCCTG ACGCATACCG TCCGCCACTT CAGCAAGGAG
GAGGTGCTCT ACCTCACCCA GCACCTGCCC GTCGAACACC TGCCCGAGCC GGACCGAATG
GACGAGAACG GCAACCCCCT CTGGACGAAC AAGCAGGTCT TCTCGCTCGT TCTCCCCGAC
AACCTGAACA TGGTCTTCCA GGCCTCGTCG TGCCAGAACT GCGAGACCTG CAAGCGGGAG
ATGTGCGAGA ACGATGCGTT CGTCCGGGTC GTCAACGGGA ACCTGATCAC CGGTACCATC
GACAAGAAGG GGATCGGCGC GTTCGACGGT CAGATCCTGC ACCGGATCAT CAGGCAGCAC
GGCATGAAGC GGGCAGCCCG GTTCATCGAC GACGTGACCA AACTCTCGAT CCGGGGCATC
ATGCTCGAAG GGTTCTCGTT CGGTATTGAC GACGAAGACC TGACCCGGAC GGAGTACGGC
CAGATCGACG AGGTGCTCGA TGGCGCCATC AGCGATGTCG ACCGCCGGAT CAAGATCTAC
AACGAGGGAC AGCTCGAACC GATGCCCGGG CGGACGCTTG AAGAGACACT CGAGATGCAG
ATCATGCAGG TGCTCGGCAA GGCCCGTGAC CGCACCGGTG AGATTGCCGG GCGGCATCTC
GGGATGGACA ACAGTGCCGT GGTGATGGCG GTCTCCGGTG CGCGTGGGTC GATGCTGAAC
CTGACGCAGA TGGCCGGGTG TCTCGGACAG CAGTCCGTTC GTGGCGAGCG AATCATGCGT
GGCTACGAGG ACCGGACGCT GCCGCACTTC AGGCGGAACG AGCGCGGCGC CGAGGCGCAC
GGGTTCATCA CCAACAGTTA CAAGAGCGGT CTCTCTCCCA CCGAGTTTTT CTTCCACGCC
ATCGGTGGGC GTGAGGGTCT TGTGGACACT GCGGTCAGGA CGTCGCAGAG CGGGTACCTC
CAGCGGCGGA TGATCAACGC CCTGCAGGAC CTCAAGGTGG CGTACGACGG CACCGTCCGG
ACGACGGGCG GCCGGATCAT CCAGTTCCGC TACGGCGAGG ACGGAACCGA CCCCGGAAGG
AGCAGTTACG GCGCCCCGGT GGACGTGAAG GGTATCATCG AGAGCGTGCT AAAGGAGGAG
GTCAAATGA
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| Protein sequence | MTSPKRVGRI EFGLFSPKEI RKMSVRKIIW ADTYDDDGFP YPQGLMDLNL GVIDPGLRCK
TCDQKAADCP GHFGHIELAK PVIHVGYTRL IRKLLRVTCR SCSRLLMTSE EVEKIIGPED
SELAGEIVSE KDIKKERVCP HCGEQQLKIN FEKPTTFSEV FVEDGRKVEH KLTPADIRAR
LERIPDDDLR ALGVNPDVAR PEWTILTVLP VPPVTMRPSI ILENGQRSED DLTHKLVDII
RINQRFKENQ DAGAPQLIIE DLWELLQYHV TTYLDNEVAG CPPARHRSGR PLKTLSQRLK
GKEGRFRGSL SGKRVNFSAR TVISPDPNLS IGEVGIPLAI ANEMTLPIRV TTFNIEEMRQ
YVLNGPERPT IRSPCGANYA IRPDNRRMRL SDANLETVAE MIEPGWTVER QLKDNDIVLF
NRQPSLHRMS IMAHRVVVMD GKTFRLNPAV CPPYNADFDG DEMNLHIPQT EEARAEAEIL
VSVSSNILSP RTGGPIIGGI HDHISGIFLL THTVRHFSKE EVLYLTQHLP VEHLPEPDRM
DENGNPLWTN KQVFSLVLPD NLNMVFQASS CQNCETCKRE MCENDAFVRV VNGNLITGTI
DKKGIGAFDG QILHRIIRQH GMKRAARFID DVTKLSIRGI MLEGFSFGID DEDLTRTEYG
QIDEVLDGAI SDVDRRIKIY NEGQLEPMPG RTLEETLEMQ IMQVLGKARD RTGEIAGRHL
GMDNSAVVMA VSGARGSMLN LTQMAGCLGQ QSVRGERIMR GYEDRTLPHF RRNERGAEAH
GFITNSYKSG LSPTEFFFHA IGGREGLVDT AVRTSQSGYL QRRMINALQD LKVAYDGTVR
TTGGRIIQFR YGEDGTDPGR SSYGAPVDVK GIIESVLKEE VK
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