| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0275 |
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| Symbol | |
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| ID | 4846389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 252674 |
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| End bp | 253531 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640114947 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001046191 |
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| Protein GI | 126178226 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000178849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAA TCAGCACGGA ACGGTCCCAG GTTCTTGCAG CCCGCGTTGC CGAAAAACTT
GGGGCCCCAC TGGTCGAGAC GAAATTCACC CGATTTCCCG ACGGGGAACT GTATCTTAAG
TGCAGAGAAC TGGACGACGA GACCCTGATC GTCAGCAGCA TCGTGGACAA CGATATGTTC
ATGCAGACCC TTCTCGCGAT CGATGCCGCC GATCAATCGA AGAACACGCT GGTGGTTCCG
TATCTCGGCT ACTCCCGGCA GGACAAACGC TTCTCCCCCG GCGAGCCGAT CAGCGCCCGG
GCGGTCGCAC GGGCCCTCTC GGCCGGCATC GAGCGGGTCT ACGTCGTCAA CATCCACGAC
CCGGGCGTGC TGGGTCACTT CGGCGTCCCG GCGAAGAACG TCACCATCGC CCCGGCCGTC
GGGGGGTACG TCGGCGACCT GCGCCTGAAA AACCCCCTGG TTCTCGCACC GGACGAGGGC
GCGATCGGCT TCGCTTCGGA CGTCGCGGCG GTCGGCGGAT GGGACTGCGA CCACCTCGAA
AAGACCCGGC TCTCGGGCGA GGAGGTCAGG ATCGCCCCGA AGACCATCGA TGCGGCCGGC
CGGGACGTCG TGATCGTGGA CGACATCATA TCCACCGGCG GAACCCTCGC GACCGCCGCC
TGCATGCTCC GGGAACAGGG GGCCGCATCC ATCCACGCGG CCTGTGTCCA CGGGGTGCTC
ACGAGCGGCG CCTACACCCG TCTGCGGGCG GCGGGAGTCT CTTCGGTCGT CTCCAGCGAC
ACCTACGAGA ACGCCTCAAG TTTCATATCT GCGGCAAGTG CTATCGTCAC CGCGATCAGG
GAAGATGCTC ACCGTTGA
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| Protein sequence | MRIISTERSQ VLAARVAEKL GAPLVETKFT RFPDGELYLK CRELDDETLI VSSIVDNDMF
MQTLLAIDAA DQSKNTLVVP YLGYSRQDKR FSPGEPISAR AVARALSAGI ERVYVVNIHD
PGVLGHFGVP AKNVTIAPAV GGYVGDLRLK NPLVLAPDEG AIGFASDVAA VGGWDCDHLE
KTRLSGEEVR IAPKTIDAAG RDVVIVDDII STGGTLATAA CMLREQGAAS IHAACVHGVL
TSGAYTRLRA AGVSSVVSSD TYENASSFIS AASAIVTAIR EDAHR
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