Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0261 |
Symbol | |
ID | 4846234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 239021 |
End bp | 239656 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640114932 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_001046177 |
Protein GI | 126178212 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.243144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATACG ACCTCTACGT AGTCACCGAC GAGACGATCG GGCGCGGACG CACTCACACG GATCTCGCCC GCCTCGCCGC CGCCGGCGGC GCGGACGTGA TCCAGCTCCG TGACAAGAGG CTCCCGGGCC GCGACCTCCT CAGCGCGGCC GTAGCCATAC GTGAGATCAC CACTGACGCC GGCGCGCTCT TCATCGTGAA CGACCGCCTG GACGTCGCCA TCGCGGCCGG TGCCGACGGG GTCCACCTCG GCGCAAACGA CCTCCCCGTG GGCGAGGCAC GGCGCATCGT CCCGCCGGGG TTCCTCATCG GGGCATCGGT CGGGTCGGTC GCCGCGGCTG TCCGGGCCGC GGCGGAAGGG GCCGACTACG TGGCGCTCAG CCCGACGTTT GCGACCGGGT CAAAGGACGA CGCGGGGCCG GGGTGCGGGC TTGCCGCACT CAAAGAGATC CGTGCCGCGG TATCCCTCCC GCTCGTCGCG ATCGGGGGGA TCACCGCAGC AAACGTCGCC GACGTCATCG CCGCGGGGGC GGACGGCGTC GCGGTGATCT CGGCGGTCGT GGGAGAGGGC GACGTCACCG CCGCCGCACG GAGCCTCCGC GACCGGATCG CCGCCGCGAA AGCGGAAGGC CGTTAA
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Protein sequence | MGYDLYVVTD ETIGRGRTHT DLARLAAAGG ADVIQLRDKR LPGRDLLSAA VAIREITTDA GALFIVNDRL DVAIAAGADG VHLGANDLPV GEARRIVPPG FLIGASVGSV AAAVRAAAEG ADYVALSPTF ATGSKDDAGP GCGLAALKEI RAAVSLPLVA IGGITAANVA DVIAAGADGV AVISAVVGEG DVTAAARSLR DRIAAAKAEG R
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