Gene Memar_0233 details

Gene Information

• Locus tag: Memar_0233
• ID: 4846812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 210719
• End bp: 211246
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640114904
• Product: ZPR1-related zinc finger protein
• Protein accession: YP_001046149
• Protein GI: 126178184
• COG category: [R] General function prediction only
• COG ID: [COG1779] C4-type Zn-finger protein
• TIGRFAM ID: [TIGR00310] ZPR1 zinc finger domain; [TIGR00340] ZPR1-related zinc finger protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.939784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGGGAGT CCCATCCGGG AACCTGTCCC GCCTGCGGGG GCGAGATCCG GATCGTCCAT 
CACCGTCTCG ACATCCCCCA CTTTCCCGAT ATCCTGCTCG TCTCTATCGC CTGCGACGCC 
TGCGGCTTCC GGCACACCGA CACCATCATC CTCGGGGAGG GCGACCCGGT CCGGTGGACG 
GTGCGGGTGG AGGAGCCCGG CGACCTCGCC ATCCGGGTGG CGCGGAGCAC GACGGGGACG 
ATCGAGATCC CGGAACTCGG TCTTCGGGTC GAACCCGGCA CCGCCTGCGA GGGGTTCGTC 
ACCAATATCG AGGGAGTCCT CTCCCGTTTC GAGCAGGCGG TGGAGACGAT CCTGGCAAAC 
CCCGAGAGCG AAGACGAGCG GGCGGCCGCA CTCAGGATGG TGGAGACGAT CGCCGCCGCA 
CGGGAGGTGG CCTTCCCGTT CACGGTCATC CTCGAGGACC CTGCCGGGAA CAGCGCGCTC 
GTCAGCGAGA AAGCCGAAAA GATGCTCCTC GATCAGGGAG AAGCCTGA 

 

Protein sequence

MRESHPGTCP ACGGEIRIVH HRLDIPHFPD ILLVSIACDA CGFRHTDTII LGEGDPVRWT 
VRVEEPGDLA IRVARSTTGT IEIPELGLRV EPGTACEGFV TNIEGVLSRF EQAVETILAN 
PESEDERAAA LRMVETIAAA REVAFPFTVI LEDPAGNSAL VSEKAEKMLL DQGEA