| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0182 |
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| Symbol | |
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| ID | 4848374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 163211 |
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| End bp | 165031 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640114852 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001046098 |
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| Protein GI | 126178133 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGGTT GTGCGGAACT TCTATCAGAA CTTAATACAT GTGACGAACA TTGGCGCATC
GAAGCGAAAG AAACATCCAG AACTCTGGGG AAAACCGCCT CTCAGACGAT ATCGGCGTTC
TCTAACGAGC CCGGTATCGA GGGGGGGTAT CTCCTGCTCG GTGTTTCCCG CGACCCGGCT
TCCGGGAACT ATAGAGTTAC CGGCGTCCAC GAACCCGATA AATTACAGAG AGAAGTTGCT
TCACTCTGTG CCTCCGCGTT CAACCGGCCC CTGAGGCCGA ATGTGCAGGT CTGCATGGTT
GATGAAAAAC CGGTGATCGT GGTGTACATC CCCGAAGAAG TGCCCCATAA TAAGCCCATT
TACATAAAAG CGCAAGGTCT GCCGCGAGGC GCCTACCGCC GCATCGGCTC GACGGCTCAG
CATTGTACTG ACGAGGATAT CCGGATGTTC CATACGAGTG CAGAACGGAG GACGTATGAC
GAGTCGGTTA TTCCCGGTGC GTCATTGGAT GATATCGATC CGCATGCAAT CGATGAATAC
CGGCGAGCAC GACGCGCAGC CAACCCGCAT GCACCGGAGT TGAACTGGAA TGATGGAGAC
CTTCTCCTTG CCCTGAAGTG TGCGGATAAG CAAGGCGATG AGCTAATCCC CACGTTGGCC
GGGGTTCTCC TCTTTGGAAG GGATATGGCA ATCCGGAAGT ATCTCCCGCT GATGCGTGTT
GATTACATCC GCGTTCCAGG CCACAAATGG GATGGAGAGA TCTCGTACGC GCTTGAGTTC
CGCGAACCGC TGTTACGTAT GATTCCACGG GTCATCGCAG GTGTTATGGA CGATATTCCA
AGGTGCGTGG CGTTCCATGA GGGGTCCATC CAGCGGCACG AAAGACCCCT TATCCCTGAG
CGAGTCGTCC GCGAAGCGGT TGTGAACGCG CTGATGCACC GAAACTATCG ATCTTGCGGG
ACGATACGGA TTATCCGTTA TCCGGGAAGG CTGGAGATAA CGAATCCTGG ACACTCACTT
GTTGAGATCG GCGATGAGGG AAGTATTACC TCTGTTACCA GAAATCCGGC CATTGCAGCG
GTTCTGCACG ATACAAACCT GGCTGAGAAC AAAGGTAGTG GAATCCGGAT GATGGTACAG
TTAACCCGGG AAGCCCGCCT GTCCCCGCCG GTCTTTGAAT CGAATCATCA GGCCGATTAT
TTCCGCGCCG CATTTTCCCT TCACCATTTC TTCTCTGAGG AAGAACTCGA ATGGCTCCGT
GGCTTCAGCG CTGCTGACTT ATCCGATGAA GAGGCGATGG CTCTCGTCTT TGTCAGGCGG
AACGGGTCTA TCTCGAATGA GCAGTGTCGC GATCTGATCG AACTCGATGT GGTCGGTGCA
AGCAAATTGC TCGGGAAACT CCGGGATCTG GGTTTTCTTA TCCAGCATCC TCATGGCGCG
ATGACCTTCT ATACTCCAAC CGGGCAGCTC GGGGTTGCCC CTGTGTGCAC GACTCACCAG
CGGGTGGAGG TTTCGCTGGA CGAGGAGGAG ACTCTGAGTG TGGATTCTGA AGCAATCCTA
CCGGATATTG CCGAATCAAT AAGAATGCTG GGTAAAAGGA GTTCGCCACA GGAAGTCATG
CGAGTTATCG TTCAGATTTG CAGCGTGCGC CCCTCCTCTG CCGGGGAGAT TGCCCAATTG
GTTGGGAGAA GCAAAAAATG GGTATCAGCC AGTTACTTAA AACCGATGAT ACATGACGGG
CAATTGGAAT ACGTGATCCC CGGAGAGCCA AACCATCCGG AGCAGAAATA CAAAGTGGGA
AGAAGTGAAC AGGAGATCTG A
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| Protein sequence | MRGCAELLSE LNTCDEHWRI EAKETSRTLG KTASQTISAF SNEPGIEGGY LLLGVSRDPA
SGNYRVTGVH EPDKLQREVA SLCASAFNRP LRPNVQVCMV DEKPVIVVYI PEEVPHNKPI
YIKAQGLPRG AYRRIGSTAQ HCTDEDIRMF HTSAERRTYD ESVIPGASLD DIDPHAIDEY
RRARRAANPH APELNWNDGD LLLALKCADK QGDELIPTLA GVLLFGRDMA IRKYLPLMRV
DYIRVPGHKW DGEISYALEF REPLLRMIPR VIAGVMDDIP RCVAFHEGSI QRHERPLIPE
RVVREAVVNA LMHRNYRSCG TIRIIRYPGR LEITNPGHSL VEIGDEGSIT SVTRNPAIAA
VLHDTNLAEN KGSGIRMMVQ LTREARLSPP VFESNHQADY FRAAFSLHHF FSEEELEWLR
GFSAADLSDE EAMALVFVRR NGSISNEQCR DLIELDVVGA SKLLGKLRDL GFLIQHPHGA
MTFYTPTGQL GVAPVCTTHQ RVEVSLDEEE TLSVDSEAIL PDIAESIRML GKRSSPQEVM
RVIVQICSVR PSSAGEIAQL VGRSKKWVSA SYLKPMIHDG QLEYVIPGEP NHPEQKYKVG
RSEQEI
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