| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0160 |
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| Symbol | |
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| ID | 4847710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 147683 |
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| End bp | 149176 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640114831 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001046077 |
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| Protein GI | 126178112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGTG AGTATCTCAG GAGGGAGGCG GTCTTCCTCT TCTCCGCCGG GATCATCCTC
TTCTTCATCG GGTTCGGGGT CGCGAGGCCC GACCTCCTTG ATTCGGCCTC GTCCGCGGTC
CACGCCGCAA TCCTCGACAA CTTCAGCTGG CTCTACCTCA TCTCGGTCTT CTTCTTCCTC
GTCTTCGCGC TCGCACTCGC GCTCTCGCGC TACGGGACGA TCAAACTCGG CTATGACGCA
GAACGGCCGC AATACGGATT CTTCGGCTGG ATCGCGATGC TCTTTGCCGC CGGGATGGGG
ATCGGGCTCC TCTTCTGGGG AGTCTCCGAA CCGCTCGTCC ACTTCCTCCA GCCGCCCCCC
TTCATCGACG CCGCATCCCC CGACGCCGCC TCGTTCGCCA TGCGCTACGC GTTCTTCCAC
TGGGGGATTC ACCCGTGGGC GATCTACACC ATCGTCAGCC TTTCTATTGC GTATTTCTCG
TTCCGGCGCG GGATGCCCGC CCTGATCAGC TCCTGCTTCT ACCCGGTTCT CGGCGAGCGG
ATCTACGGCG CCGCCGGGAA GACGGTGGAC GTGCTCGCGG TCTTTGCGAC GGTCTTCGGG
ACCGCGACGT CGCTCGGGTT CGGCGCCCTC CAGATCCACA GCGGGCTCAC CCATCTCTAC
GGGCTCTCGT CCGCGATCTC CGTCACCATC GGGATCATCC TCATCGCGAC GGCGCTCTTC
ATGGCGTCCG CGATCATCGG GGTGGAGAAA GGCGTCCAGG TCCTCTCGAA ATTCAACATC
GTCCTGGCGA CGGTGCTTCT CTTCCTCGTC CTCGCCCTCG GATCGCCGCC TTACGTCCTC
AACGTCTTCG CCTCCACCCT CGGCGGCTAC ATCAACAACA TCATCGACCT GAGCCTCCAG
TCCTACCCGT TCGCGGGGTT CGAGTGGAGC AGGGACTGGA CGGTCTTTTA CTGGGCATGG
TGGATCTCGT GGTCGCCGTT CGTGGGGCTC TTCATCGCCC GGATATCACG GGGCCGGACG
ATCCGGGAGT TCGTCCTGAC CGTCCTCACG GTTCCTACCC TCTTCACCTT CGTCTGGTTC
ACGATCTTCG GGGGATCGGC GCTGCACCTC GAACTCGAAG AGGGAGCGGG CATCGCCGCC
GTCGCGGGAG AGGACGTCTC GCTCGCCCTC TTCGCGTTCC TCGAGCACTA CCCGTTCGCA
GGAATCCTCT CGCTCGCCGC GATACTTCTC CTGATCGTCT TCTTCATCAC CTCGGCGGAC
TCCGCGACGG TCGTCCTCGG CTCGCTCACA TCGGGCGGGG GCCTGGTCGT CCCGAACTAC
AAGAAGGTCG TCTGGGGACT CTCCCTCTCC GCCGTCGCGA TCGTCCTCCT CCTCACCGGG
GGGCTTGACG CTCTCCAGGT GATGGCGATC ACCGCGGCGT TCCCGTTCAT GCTCGTGATG
ATCGGCCTCT GCTACACGCT CGCGATCGGG CTGTCGCAGG AGAAGGTGCA GTGA
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| Protein sequence | MLREYLRREA VFLFSAGIIL FFIGFGVARP DLLDSASSAV HAAILDNFSW LYLISVFFFL
VFALALALSR YGTIKLGYDA ERPQYGFFGW IAMLFAAGMG IGLLFWGVSE PLVHFLQPPP
FIDAASPDAA SFAMRYAFFH WGIHPWAIYT IVSLSIAYFS FRRGMPALIS SCFYPVLGER
IYGAAGKTVD VLAVFATVFG TATSLGFGAL QIHSGLTHLY GLSSAISVTI GIILIATALF
MASAIIGVEK GVQVLSKFNI VLATVLLFLV LALGSPPYVL NVFASTLGGY INNIIDLSLQ
SYPFAGFEWS RDWTVFYWAW WISWSPFVGL FIARISRGRT IREFVLTVLT VPTLFTFVWF
TIFGGSALHL ELEEGAGIAA VAGEDVSLAL FAFLEHYPFA GILSLAAILL LIVFFITSAD
SATVVLGSLT SGGGLVVPNY KKVVWGLSLS AVAIVLLLTG GLDALQVMAI TAAFPFMLVM
IGLCYTLAIG LSQEKVQ
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