Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0116 |
Symbol | |
ID | 4845994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 107007 |
End bp | 108482 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640114787 |
Product | phytoene dehydrogenase-related protein |
Protein accession | YP_001046033 |
Protein GI | 126178068 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGCTG TAATTGTTGG GGCCGGGTTC GGGGGTCTCT CCGTCGCCGC CCTTCTTGCG AAGGGCGGCT TCGACGTCAC GGTCGTCGAG AAGAACGAGC GGCCCGGGGG CCGGGCGAGC ATCCACCGCG ACGGGGGGTT CACGTTCGAC ATGGGGCCGT CGTGGTACCT GATGCCCGAC GTATACGACC GGTTCTTCGC GGAGTTCGGG AGGAGCCCGG GAGACTACTT CCCGCTCGCG AGACTCGACC CGTCATACCG GGTCTTCTTC GGGACCGACC GGGTCGCGGA CGTCTCGGCC GATCTCGAGA AGAACTACGA TCTCTTCGAG TCGTTCGAAC CCGGAGGAGC CGGGAAACTC CGGGGTTACC TCGCCGGGGC GGAGGAGACC TACCGGACAA CGATGGACGA CCTCCTCTAC CGGGACTACC GGAGCATCCT CGACTTCTTC GACCGGCGGC TCCTCTCCCG GGGAAGGAAA CTCCATCCCT TCGAGAACCT GGAGTCCTTC GTCAAGAAGC GCTTCGCAAG CGACGAAGCC CGTAAAATCG TCCAGTATTC CATCGGTTTC CTCGGCGGGT CGCCGGAAAA CACCCCCTCG TTCTACCACA TCATGACGCA TATCGACATG AACATGGGCG TGTGGTATCC GGAAGGGGGC ATGCGGGCGG TGGTCGAGGC TCTGGTCTCG CTCGGCCGGG AGTTCGGGGT CGAGTACCGC TACAACGAAC CGGCGACCGC CATCGACGTG GAAAGGGGGC TCGCACGCCG GGTCGTCACC CCTCTCGGTG CGCACGAGAC CGATATCGTC GTGGTGAACG CGGACTACCC GTTCACGGAA CTCTCCCTCC TCCCCGAAGG CTCCCGGTCA TACTCCGCCT CCTACTGGAA AAAGAAGGTC CTCGCCCCGT CCACGTTCGT CGCCTATCTC GGCGTAGACC GGGTGGTCGA GGGGCTCGCG CACCATAACG TCTTCCTCGA GCCCGACTGG GAGGAGGGGT TTGAGACGAT CTTCGACCCC AAGAAAGCCG CCTGGCCGGA GAATCCTTCA TTCTACGTCA ACGTCCCCTC GCGGACGGAT ACGACCGCCG CCCCGAGCGG CACCGATACG CTCTTCGTCC TCGCGCCCCT CGCCCCCGGC ATCGAGGATA CACCGGAACT CCGCGAGCGG TTCTACGACC TCCTCATGAG CCGGATGGAG GAGATCCTCG GCGAGAATAT CCGTGACTCG GTCGTGTCCC GGCGAATCTT CGCGCTCTCG GACTTTTCGA ACCGTTACAA CGCCTACCGG GGCACGGCGC TCGGTCTCTC CCACACCCTC CGGCAGACGG CGCTCTGGCG CCCCGCACAC CAGAGCAAGC GTGTCAGGAA CCTCTACTAC ACCGGCCAGT ATACCCACCC GGGGATCGGG GTGCCGATGA CCCTGATATC CTCCCAGATC GTCGCCCGCG AGTTGACCGA CCGTTACCGC CGGTGA
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Protein sequence | MRAVIVGAGF GGLSVAALLA KGGFDVTVVE KNERPGGRAS IHRDGGFTFD MGPSWYLMPD VYDRFFAEFG RSPGDYFPLA RLDPSYRVFF GTDRVADVSA DLEKNYDLFE SFEPGGAGKL RGYLAGAEET YRTTMDDLLY RDYRSILDFF DRRLLSRGRK LHPFENLESF VKKRFASDEA RKIVQYSIGF LGGSPENTPS FYHIMTHIDM NMGVWYPEGG MRAVVEALVS LGREFGVEYR YNEPATAIDV ERGLARRVVT PLGAHETDIV VVNADYPFTE LSLLPEGSRS YSASYWKKKV LAPSTFVAYL GVDRVVEGLA HHNVFLEPDW EEGFETIFDP KKAAWPENPS FYVNVPSRTD TTAAPSGTDT LFVLAPLAPG IEDTPELRER FYDLLMSRME EILGENIRDS VVSRRIFALS DFSNRYNAYR GTALGLSHTL RQTALWRPAH QSKRVRNLYY TGQYTHPGIG VPMTLISSQI VARELTDRYR R
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