| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0003 |
|---|
| Symbol | |
|---|
| ID | 4846875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2259 |
|---|
| End bp | 3419 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640114674 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_001045920 |
|---|
| Protein GI | 126177955 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.987312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAGATT TCGTCTCGAA ACGGGCCCGC GCCATACCTC CTTCGGGTAT CCGGAAGTTC
TTCGATATCG CCCAGACGAT GGAAGACGTC ATATCCCTGG GCGTCGGCGA GCCGGACTTC
GTGACGCCCT GGTGCGTCTG CGAGGCGTCC ATCTACTCCA TCGAACAGGG GTCGACCGCC
TACACCTCGA ACAAGGGGAC GCCCCGGCTT CGGGCCGCCA TCAGCCGCTA CCTCGATACC
CGCTTTTCCA CGCACTACGA TCCCGAGGCG GAGATCATCG TCACCTGCGG CGTCTCGGAG
GCGGCCGATA TCGCCATCCG GGCCGTCACG GATCCCGGCG ACGAGATCCT GGTCGCCGAG
CCCTGCTATG TCTCCTACAA CCCCTGCGTC TCTCTTGCCG GAGGAACCCC GGTGCCCGTT
CTCTGCCGGG CGGAGGACGA GTTCCGGCTG ACGGCCGATG CGCTCGCGGA GAGCATCACC
CCGCGGACGA AGGCACTGAT TGCAAACTTC CCGAACAACC CCACCGGCGG GGTGATGGAG
GAGGCGGACT GGCACGCGAT CGCCGATCTC CTGGTCGACC ACGACCTCCT CCTCATCAGC
GACGAGGTTT ATGCCGAGCT CACCTACGAC GGCGACCATT TCTCACCGGC AAGGATCCCC
GAACTCCGCG AGCGTACGAT CACCCTGAAC GGGTTCTCGA AGGCTTTCGC CATGACCGGG
TGGCGGATCG GTTACCTCTG CGCTCCCCCC GAGATCGCCG CGGCGGCCCT GAAGATCCAC
CAGTACGTTG CGCTCTGCGC TCCTGTCATG GGGCAGATCG CGGCTTATGA AGCGCTCCGG
AACGGGGAGG CCGAGAAGGA TGCGATGGTC CGGGAGTACC GTCTCCGGCG CAACCTCTTC
GTCGACGGGC TGAACAAACT CGGTCTTGTC TGCCACGTCC CGAAAGGTGC GTTCTATGCC
TTCCCGTCGG TGGAGAGCAC CGGCATGACC GATGTCGAGT TCGCGGAGGG GCTTTTACGC
GAGCAGCACG TCGCGGTCGT TCCGGGGAGC GCTCTCGGCC CCTCCGGCGC CGGGCACGTA
CGGTGCGCCT ACGCCGTCTC GCGCGACGAT CTCAAAGAGG CGCTCTCCCG GATGGGGGCC
TTTTTGGGGT CAGTAAAATA A
|
|---|
| Protein sequence | MRDFVSKRAR AIPPSGIRKF FDIAQTMEDV ISLGVGEPDF VTPWCVCEAS IYSIEQGSTA
YTSNKGTPRL RAAISRYLDT RFSTHYDPEA EIIVTCGVSE AADIAIRAVT DPGDEILVAE
PCYVSYNPCV SLAGGTPVPV LCRAEDEFRL TADALAESIT PRTKALIANF PNNPTGGVME
EADWHAIADL LVDHDLLLIS DEVYAELTYD GDHFSPARIP ELRERTITLN GFSKAFAMTG
WRIGYLCAPP EIAAAALKIH QYVALCAPVM GQIAAYEALR NGEAEKDAMV REYRLRRNLF
VDGLNKLGLV CHVPKGAFYA FPSVESTGMT DVEFAEGLLR EQHVAVVPGS ALGPSGAGHV
RCAYAVSRDD LKEALSRMGA FLGSVK
|
|---|
| |