Gene Mchl_5544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5544 
Symbol 
ID7119326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011758 
Strand
Start bp168076 
End bp169326 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content66% 
IMG OID643528212 
Productglycosyl transferase family 28 
Protein accessionYP_002424208 
Protein GI218533393 
COG category[C] Energy production and conversion
[G] Carbohydrate transport and metabolism 
COG ID[COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00888029 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGGTTCC TGCTCGCGGT GCTGGGCACA CATGGAGACG TTCTGCCCTT CCTCGCCCTC 
GGGAGCGCGT TGCTGCGGCG GGGGCATGAG GTCGCGCTCA GCGCTCCTGC TCCATTCGAG
AAACACGCGG ATCGCGCCGG GCTGTCCTTC CACGCGATCG GTACCCAGGC CGACTTCGAT
CGCGTCGTGC GCGAGCCGGA ACTCTGGCAC CCGCGCCGCG GCATTGAGAC CGCGTTCCGG
TATGGCCTGG ATTTCGCGCC GGACGTGTTC CGATGGATCG AGGCCAACAG CGCGAAGCCC
TGCATCGTCA TCGCGTCCCC GAGCAGCTTC GGGGCGCGGA TTGCGCAGGA TCGCTTCGGC
CTACCGTTGG TGACGCTGCA CGTCATGCCG CTCCTGATCG AGAGCCGGTA CGATCCGCCC
AGACTGCCGG GCCTCCCGCT TCCCGATTTT CTCCCCGCTC GGTTTCGGCA TTGGGTTGGC
CGGGGAGCAG ACAAGTACGT GATCGATCCA GCCGCCTTGC CGAGGCTCAA CGCGTTTCGA
GCTAGCCTCG ACCTGCCGCC CGTGCGGCGC CTGCGTCATT GGTGGAACAG CCCGACCCAG
GTGCTCCTGA TGTTTCCGGA GTGGTTTGCT CCCCCTCAGC CGGATTGGCC GAAGCAGGCC
GTACAAGTCG GCTTCCCGAT GTCGGACCGC TTCGGCGACG TTGGAGAGCT CAGCCCGGAG
CTGGCCGCCT TTCTCAACGC TGGCGAGCCG CCGTTGGCTT TCACCTACGG TTCTGGGATG
AGGCAAGGGC AGGCCTTCTT CGAGACAGCC GTTGCCGCGT GCGCGCGTCT CGGCCACCGC
GGCGTACTTC TGGCGCCTCA GACCGGACAG GTCCCCGCAG GTCTGCCAAC GAGCATCCTG
CATCTGCCCT ACGCTCCGTT CAGCAAGCTT CTTCCGCACT GCTCCGCACT TGTTCACCAT
GGCGGGATCG GAACGGTCGC GCAGGCGCTG GCCGCAGGCA TCCCCCAGCT GGTCGTGCCG
GTCGCCTTCG ACCATTTCGA CGAGGCGCGG CGCCTGAAGC ATCTAGGTCC GGGTAGGGCG
CTGAGCCGAC GCCGCTTCAC CCCGGCTCGG GCTGCGCGTG AGATCCGCCG CATGCTGAGG
GATCCTAAGG TCCAGGAAGC ATGTAACCAG GCTAAATGCC GGTTGATCGA CGAGGATGGC
GTGCAAGCAG CCTGTGACGC TGTCGAGCGC CTTTTGGCCA TCCGCCCGTG A
 
Protein sequence
MRFLLAVLGT HGDVLPFLAL GSALLRRGHE VALSAPAPFE KHADRAGLSF HAIGTQADFD 
RVVREPELWH PRRGIETAFR YGLDFAPDVF RWIEANSAKP CIVIASPSSF GARIAQDRFG
LPLVTLHVMP LLIESRYDPP RLPGLPLPDF LPARFRHWVG RGADKYVIDP AALPRLNAFR
ASLDLPPVRR LRHWWNSPTQ VLLMFPEWFA PPQPDWPKQA VQVGFPMSDR FGDVGELSPE
LAAFLNAGEP PLAFTYGSGM RQGQAFFETA VAACARLGHR GVLLAPQTGQ VPAGLPTSIL
HLPYAPFSKL LPHCSALVHH GGIGTVAQAL AAGIPQLVVP VAFDHFDEAR RLKHLGPGRA
LSRRRFTPAR AAREIRRMLR DPKVQEACNQ AKCRLIDEDG VQAACDAVER LLAIRP