Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5524 |
Symbol | |
ID | 7119306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011758 |
Strand | - |
Start bp | 154558 |
End bp | 156480 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643528195 |
Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002424191 |
Protein GI | 218533376 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.118768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAACC AGCGCGCGAT CCGTACCGCT TGGGAAGCCT TCCTCTCCGA GGGGCGCCTG TTGCCGGGGC CGAAACCGGC GATCTCGGAG TCCTGGGAAC GGTGCCGGGC GCGCGGCGTG TGGCACCGCC AGTCGGAGGC ACCGCTCGTC GGGGAACCGG AACTCTTCAG GCTGAAATCG CAGAGCCGGC GCCTGCTCTG CGCGGCGAGG CCCGCGCTTC AACGCTCCTC GCTGCTTCTC TCCGAGGCCG CCTCGATGAT GCTCCTGGCC GACACCCAGG GATTCATCGT CGAAGCCGCT GGCGACCGGC GCGTCGTCGA GGAAGGACGC CGGAACCACC TGGAGGAAGG CGGACGCTGG GACGAGGGAT TGATCGGCAC CAACGCCATC GGGACCGCGC TGGCTCTGGG ACGGCCGATC TGCATCAATG GGGCCGAGCA TTTCTGCCAG GACGTCCAGC GCTGGAGTTG CGCCGCCGCA CCCGTCCACC ATCCGAATGA CGGAACGCTG CTCGGCGTCG TCGACATCTC CGGACCGATC GACAGGTTTC ATCCCCAGAG CCTCGCCTTC GCCGCCGCCC TGGCACACGA GGTCCAGATC TCTCTCGGCC ACCAGATGGA GGCCGACCAT GCCCTGCTGC TCCAGTATTT CCTCGCGAAG CGGTCAGTCT GGCTCAGCGA CGAGATCCTC GTCGTCGATC ATCAGGGCAT CCTGGTCCAC GCCAGCGAGG AAGCCCAGCG CCGGCTGGAT TGCGCTTCGA ATGGGGATCT GGCGAAGGAG GTCCGCACCT TCATCGGCGC AGCAGAGCCG GAGGCGTGGT TGCAGAATTG CCGCCGACGC TTCCCGCAGG CCAGTGTCGA AGTGGTCCGG CAAGCCGGCG AGGCGGTCGG TTGCCTGATC GTCCTCCACG CCTCGCAGCG TTCCGAAGCT CAGGCCCGAC GAACGCACCG GCCCCTCACC AAAACGATGC CGGGGGAGCG AACCGTCACC TTCGACGAGA TCCTCGGCGA CAGCCCTGCG ATGCGAGCGG TCAAGGAGCG GGCCTGCCGG CTGGCATCCC TGCCCCTGCC GGTCCTGATC GAGGGCGAGA CCGGCGTCGG CAAGGAGTTG TTCGCCCGGG CGATCAAGGA GGCGCGGACG CCGGACGGCC CGTTCATCCC CCTGAACTGC GGAGGCATGG CCCGCGACTT GGTGGCGAGC GAGTTGTTCG GGTACATCAA AGGGGCCTTC ACCGGCGCCG ACGAGAAGGG GCGACCGGGC AAGATCGAGC AGGCGGACGG CGGCGTCCTG TGCCTCGACG AGATCGGCGA GATGCCGCTC GACCTCCAGG CCTACCTGCT GCGCGTTCTC GAAGACGGGA TCGTGTACCG GATCGGCGGT CACGAAGGGC GTCAGGTCGA TTTCCGGCTC GTCTCGATGA CCAATCGGGA TCTGGAGGCC GAGATCGAGG CCAAGCGATT CCGACGGGAT CTGTACTATC GCATCGCGGC GGTCCGCCTG CGGATCCCAC CCCTGCGCGA GCGGAGCGCA GACGTGCTTC AACTCGCGCA CCACTTCATC CAGGGCGCGG CGGCACGCTT CGGACACCGT CCCCCACGCC TCGCGGCAGT CGTCGAGGCT GCTCTCTCGG CGCATCCCTG GCCCGGCAAC GTGCGCGAGT TGCGCAATGT CGTGGAAGCG ATGGTCGCGA TGGCCGGCCG AGACGACGAA CTCAGCGAGG ACGACCTTCC GGAACCGCTG AGGGCACGCA GCGTTCCGGC GTCAGGTGTC GATCTGCATT CCGTCGAACG CGCCGCCATC CTGGCCAAGC TGGAAGCCTG CGGCGGGAAC GTGACCGAGA CGGCACGGCA GCTCGGGATC GCCCGATCGA CCCTCTACCT GCGCCTGGCG GAATTCGGCC TGCGCTCGAC CTGCCAGCGC TGA
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Protein sequence | MHNQRAIRTA WEAFLSEGRL LPGPKPAISE SWERCRARGV WHRQSEAPLV GEPELFRLKS QSRRLLCAAR PALQRSSLLL SEAASMMLLA DTQGFIVEAA GDRRVVEEGR RNHLEEGGRW DEGLIGTNAI GTALALGRPI CINGAEHFCQ DVQRWSCAAA PVHHPNDGTL LGVVDISGPI DRFHPQSLAF AAALAHEVQI SLGHQMEADH ALLLQYFLAK RSVWLSDEIL VVDHQGILVH ASEEAQRRLD CASNGDLAKE VRTFIGAAEP EAWLQNCRRR FPQASVEVVR QAGEAVGCLI VLHASQRSEA QARRTHRPLT KTMPGERTVT FDEILGDSPA MRAVKERACR LASLPLPVLI EGETGVGKEL FARAIKEART PDGPFIPLNC GGMARDLVAS ELFGYIKGAF TGADEKGRPG KIEQADGGVL CLDEIGEMPL DLQAYLLRVL EDGIVYRIGG HEGRQVDFRL VSMTNRDLEA EIEAKRFRRD LYYRIAAVRL RIPPLRERSA DVLQLAHHFI QGAAARFGHR PPRLAAVVEA ALSAHPWPGN VRELRNVVEA MVAMAGRDDE LSEDDLPEPL RARSVPASGV DLHSVERAAI LAKLEACGGN VTETARQLGI ARSTLYLRLA EFGLRSTCQR
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