Gene Mchl_5457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5457 
Symbol 
ID7119240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011758 
Strand
Start bp82319 
End bp82855 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID643528138 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_002424134 
Protein GI218533319 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACAAT TCGTGACTCG CCTCGGCACC GGCTTCGACG TTCACGCCTT CACGGAGGGC 
GACCATGTCT GGCTCGGCGG CGTGAAGATC CCCGCCGACC GCGGCGTGCT CGCGCATTCC
GATGGCGACG TGGCCCTGCA TGCGCTCACC GACGCGCTGC TCGGCGCCAT CGCCGATGGC
GATATCGGCA CGCATTTCCC GCCCTCCGAC GAGAAGTGGC GCGGGGCGGC CTCCGACCAG
TTCCTGGCCC ATGCCTGCGA GTTGGTACGG GCGCGCGGCG GCAAGATCGA CCATCTCGAC
GTGACCGTTC TGGCGGAGGC GCCCCACATC GGCCAGCACC GCGAGGCAAT CCGGCAGCGC
ATCGCCGAGG TGGCCAGCGT GCCGCTCTCC TCGGTGTCGA TCAAGGCGAC GACTATGGAA
AAGCTCGGCT TCGTCGGCCG CGCCGAAGGG CTCGCTGCCC AAGCCGCCGC CACGGTGCGA
CTACCCGAAC CGGGTTCTTC CGGAATTGGC GTGACTGCTG GACGGACTGA AGACTGA
 
Protein sequence
MTQFVTRLGT GFDVHAFTEG DHVWLGGVKI PADRGVLAHS DGDVALHALT DALLGAIADG 
DIGTHFPPSD EKWRGAASDQ FLAHACELVR ARGGKIDHLD VTVLAEAPHI GQHREAIRQR
IAEVASVPLS SVSIKATTME KLGFVGRAEG LAAQAAATVR LPEPGSSGIG VTAGRTED