Gene Mchl_5355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5355 
Symbol 
ID7116272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5741256 
End bp5742002 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID643528047 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002424043 
Protein GI218533227 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGA CGACCCTCGA CGACCTCGCC TTGCACCCCG ATGACGAGGT GCCGACGCTC 
CCTGCTGCTG TCCAGCAACG CCTCGGAGCG CTTCTCGCCG ATGCCTATGC GCAGATGCCG
GGGAATCCGG GTGTCGAAGC CGGTCGCTTC GACGCCTTGC TGGCCAGGCT GGAGACCGTC
CTCGTCGCCC AGGAAGGGAA GGACGAGGAA TCGTTCCGGG CCGCCATCAT CGAGATGACG
CCGCGCCTCT ACAACTTCGC CATGTCGCTG ACGAAGAACC CGTCGGCCGC CGACGACCTC
GTGCAGGATA CGTTCCTGCG GGCGTGGCGC AGCCGTGCGC GTTTCACCGT CGGCACGAAT
CTCGGCGCGT GGCTGTTCAC GATCATGCGC AACGCCTTCT ACTCGCGCCA CCGCAAGGAG
GTGCGCGAGG TCGCCGACAG CGACGGCGAT TACGCCGAGC GCCTCGCAGC AGCACCCGAG
CAATCGGGCC ATGTTGATCT GATGGATGCG CAGACCGCGC TCGCCAAGCT TCCCCTGCCG
ATGCGGCAGG CGTTGATCCT CGTGGCGATC GAGAACCTCA GCTACGAGGA GGCGGCGACC
GTCATGAACT GCCGCATTGG CACGGTGAAG AGCCGGGTCT GGCGTGCCCG GGAGCAACTC
GCGCAGATCC TCGGCTACAG CGCCGCCGAT GTCGGCTCCG ACAGCATGAC GCTGTCCGCC
GTCAGCGGCT CGACCTGGAT GGCCTGA
 
Protein sequence
MPKTTLDDLA LHPDDEVPTL PAAVQQRLGA LLADAYAQMP GNPGVEAGRF DALLARLETV 
LVAQEGKDEE SFRAAIIEMT PRLYNFAMSL TKNPSAADDL VQDTFLRAWR SRARFTVGTN
LGAWLFTIMR NAFYSRHRKE VREVADSDGD YAERLAAAPE QSGHVDLMDA QTALAKLPLP
MRQALILVAI ENLSYEEAAT VMNCRIGTVK SRVWRAREQL AQILGYSAAD VGSDSMTLSA
VSGSTWMA