Gene Mchl_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5338 
Symbol 
ID7116255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5719951 
End bp5722422 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content73% 
IMG OID643528030 
ProductABC transporter related 
Protein accessionYP_002424026 
Protein GI218533210 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.591038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGC TTCTCCGGGC GCCGGCCGCG ATGCCGCTCG CCATCCTGGC CCTGACGCTC 
GCGGGCCTCG GCCTCGTCGC CGCGACGAGC GGCTACAGCC ATTTCGTCAT CGCCCTCGTG
GCACTCACGG TGGTGGCCGG AACCGGGCTC AACGTCCTAC TCGGGCTCGC CGGTCTGATC
TCCTTCGGCC ATGCCGGGTT CTACGCACTC GGCGCCTATG CGAGCGCGAT CCTGACGCTC
AAGGGCGTGA GCTTCTGGCT GGCGCTTCCG GCCGCGGCCG GGCTCTCCGC CCTGGTCGGC
GCGGCGCTCG CCGTGCCGGC GATGCGGGTG CGCGGGCCCT ACCTCGCGAT GGTGACGATC
GCCTTCGGCT TCCTCATCGA GCACGCGCTG ATCGAGGGCG GGGAACTCAC CGGCGGGCAG
AACGGCCTCG TGGTCGCGAC CGGCCCGAGC CTGTTCGGCC TTCCCCTCGG CGAACGCGAC
CTCGCATGGC TTGCGGTGAT CTCAGCGGGC CTCAGCCTCT ACAGCTTCCA CCGGCTGCGC
CATGCCCGTC TCGGCCAAGC TTTGCGTGCA GTGCGCGACG CCGATGTCGC CGCCGCCTCG
CTCGGCTTCG ATCCGGTCCG GGTGAAGACC GCCGCCTTCG CGATCTCCGC GGCGCTGACC
GGGCTCGCGG GCGCGGTGCT GCCGCCGCTG ATGCTGTTCA TCGCGCCGAG TTCGTTCCCG
TTCACGCAGT CGATCCTGTT CGTCCTCGCG GTGGTGGTCG GCGGAGCCGG CACTGTGCTC
GGGCCCCTGT TCGGCGCCCT GGTGACGGTG CTCCTGCCCG AGGCGCTGGC AGGGCTGGCC
GAGTACCGGC TGCTGTTCTT CGGCCTCAAT ACCCTGGTGG TGCTCTGGCT CGTGCCGGCG
GGCATCGTCG GCAGCCTCGC CCGGCTGCTA CCGCGGGGTG GCGGAACGCG CTCGGAGCCG
GGAGCCGAGG CACCGGATTT CCTGCACCGG ACCGGGGGCG ATCCGCTCAC CGTCGAGGGG
CTCGGCATCG CCTTTGGCGG CATCCGGGCG GCGGACGGCG TCGCCTTCGA GGCGCGGCCC
GGCGCCATCA CCAGCGTCAT CGGCCCGAAC GGCGCCGGCA AGACCACCGT TCTCAACATG
ATCTCGGGAT TCTATCGGCC GAGCGCCGGC TCGATCCGCC TCGGAGCGCG TGAGCTGGGC
GGACGGCCGG CCCACGTCAT CGCCCGCGCC GGCATCGCCC GCACCTACCA GACGACCCGG
CTGTTCGGCT CGCTTAGCGT CGTCGAGAAC GTGATCCTCG CCCGCGCCCC TGGGCGTCTG
CTGCGCCGGG CGCAAGCGCG GGACCGGCAG GATGCGGCGG CCCTGCTCGC CTTCGTCGGC
TATGCCGGCG CCCTCGACCG TCCGGCCTCC GAACTGCCCC ATGTCGACCG ACGGCTGGTG
GAGATCGCCC GCGCGCTGGC TGGGTCCCCG AAAGTGCTGC TCCTCGACGA GCCGGCCGCC
GGCCTTGCCC GGGCCGAGAC CGACCGCCTC GGCGCGCTGC TGCGCCGGAT CGCGGCCTGC
GGCATCGCGG TGATCTTGGT CGAGCACGAC ATGCCGCTGG TGATGGGCGT GTCCGACCGC
ATCCTCGTCA TGGATGCCGG CCGGCCCATC GCCCGCGGCA CGCCGGCCGA GGTGCGCCGC
GACCCCGCCG TGCTGCGAGC CTATCTCGGG GCTGCCGAGA CCCCGGCCCG GCCGCGGGCC
GCACCCTGGA GCGGTCCGGC CGACGCGGTC CTCTCTGCCC ACGGCCTGCG CGCGGGCTAC
GGCGCCGCGC CCGTCCTCGA CGGCATCGAC CTCACGGTGC GGCCAGGCGA GACGGTGGCT
TTGCTGGGCT CGAACGGGGC TGGCAAATCG ACGGTGATGC GCTCGCTCGC GGGCCTGCTG
CGCCCGGTGG AGGGCTCGGT GGTGCTGGCG GACACGCCTG TCGCGGCGCT GCCGGCGCAC
AAGATCGCGC GGCTCGGCCT CGCCTTGGTG CCGGAAGGAC GCCAAGTCTT TCCCGAACTC
ACCGTCGTCG AGAACATCCG CCTCGGCGCC TGGAGTCGCG GCGGCCGGGT CGATCCGGCC
GAGGTCGAGG CCCTGCTCGA CCGCTTCCCG CGCCTGCGCG AGCGGGCGGG CAGCCGCGCC
GGCCTGCTCT CGGGCGGGGA GCAGCAGATG CTGGCGATCG CCCGCGGGAT GATGGCGCAT
CCGCGCATCC TCCTGCTCGA CGAGCCCTCC CTCGGGCTCG CCCCAGCGAT CATCAACAGC
CTCTACGCGA CCGTGGCCGA GCTGCGCGAC CAGGGCACGA CGATCCTCAT CGTTGATCAG
ATGGCCGCGC TGGCGCTGAC CGTGGCCGAC CGCGGCTACG TCCTGGAGCA GGGGCGCGTC
GCTGCAGAGG GCACAGCAGC GGAGCTCAAG GCGGACGAGG CGCTCGAGGC CGCCTATCTC
GGCGCGGCGT GA
 
Protein sequence
MRSLLRAPAA MPLAILALTL AGLGLVAATS GYSHFVIALV ALTVVAGTGL NVLLGLAGLI 
SFGHAGFYAL GAYASAILTL KGVSFWLALP AAAGLSALVG AALAVPAMRV RGPYLAMVTI
AFGFLIEHAL IEGGELTGGQ NGLVVATGPS LFGLPLGERD LAWLAVISAG LSLYSFHRLR
HARLGQALRA VRDADVAAAS LGFDPVRVKT AAFAISAALT GLAGAVLPPL MLFIAPSSFP
FTQSILFVLA VVVGGAGTVL GPLFGALVTV LLPEALAGLA EYRLLFFGLN TLVVLWLVPA
GIVGSLARLL PRGGGTRSEP GAEAPDFLHR TGGDPLTVEG LGIAFGGIRA ADGVAFEARP
GAITSVIGPN GAGKTTVLNM ISGFYRPSAG SIRLGARELG GRPAHVIARA GIARTYQTTR
LFGSLSVVEN VILARAPGRL LRRAQARDRQ DAAALLAFVG YAGALDRPAS ELPHVDRRLV
EIARALAGSP KVLLLDEPAA GLARAETDRL GALLRRIAAC GIAVILVEHD MPLVMGVSDR
ILVMDAGRPI ARGTPAEVRR DPAVLRAYLG AAETPARPRA APWSGPADAV LSAHGLRAGY
GAAPVLDGID LTVRPGETVA LLGSNGAGKS TVMRSLAGLL RPVEGSVVLA DTPVAALPAH
KIARLGLALV PEGRQVFPEL TVVENIRLGA WSRGGRVDPA EVEALLDRFP RLRERAGSRA
GLLSGGEQQM LAIARGMMAH PRILLLDEPS LGLAPAIINS LYATVAELRD QGTTILIVDQ
MAALALTVAD RGYVLEQGRV AAEGTAAELK ADEALEAAYL GAA