Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5150 |
Symbol | |
ID | 7116188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 5516371 |
End bp | 5517726 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643527843 |
Product | General substrate transporter |
Protein accession | YP_002423842 |
Protein GI | 218533026 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0840975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGACA CCAGCGCCGC CGCGCCGCCG CTCGACGAGG CCGCCGACCG CCGCCGCCGC ATCATGGCCA TCGTCGGTTC CTCGTCGGGC AATCTCGTCG AGTGGTACGA CTTCTACTGC TACGCCTTCT TCGCTCTCTA CTTCGCCCCC GTCTTCTTCC CGGAGGGTGA CGACACGGGC CAGCTCCTGA AGTCGGCCGC GGTCTTCGCG GTGGGCTTCT TCATGCGGCC GATCGGCGGC TGGCTGTTCG GTCGCATCGC CGACCGTCTC GGTCGCAAGA CCTCTCTGAT GATCTCGGTG CTGATGATGT GCGGCGGCTC GCTCGCCATC GCCCTGCTGC CGACCTACGC GACCGTCGGC CATCTCGCGC CGGTTCTTCT CGTGATCGCG CGCATGGTGC AGGGCCTCTC GGTCGGCGGC GAGTACGGCA CCAGCGCGAC CTACATGAGC GAGGTCGCGA CCAAGGGGCA GCGCGGGTTC TTCGCCTCGT TCCAGTACGT CACGCTGATC GGCGGCCAGT TGCTCGCCTC ACTGGTGCTC GTCGTGCTCC AGAGCGTGCT CACGGCCGAG CAACTCACGG CCTGGGGCTG GCGCATTCCC TTCGTGATCG GTGCGCTGGC CGCGGTGGTC GCCCTGTTCC TGCGTCGCTC ACTCTCCGAG ACGATGAGCG CGGAGAACAA GGATTCGAAG GAAGCCGGAA CCCTCTCCGG TCTGCTCAAG CACTGGCGGG CCTTCGCCGT GGTGCTGGCC TATACGGCCG GTGGGTCGCT GTCGTTCTAC ACGCTCACCA CCTACATGCC GAAATACCTC TTCAACACCG CCCATATAGA CAAGGTGACT GCGTCGCAGA TCACGACGGT GGCACTGTTC GCCTACATGG CGATCCAGCC CTTCTTCGGC TGGCTCTCCG ACCGGATCGG CCGGAAGACG AACATGCTGC TGTTCAGCGG CCTCGGCATG GTGATGATCG TGCCGTTGAT GACGGCCATC GGCACCACCA CCGATCCCGT CCTGTCCTTC GGCCTCATCA TGACCGGGCT CGTGGTGATC AGCTTCTACA CCGGCATCAG CGGCATCGTG AAAGCGGAGC TGTTCCCGAC TCAGGTGCGG GCGCTCGGCG TCGGTTTGTC CTACGCGGTG GCCAACTCGC TGTTCGGCGG CACGGCGGAG GCGGTCGCGC TCTGGCTCAA GCATGTCGGC GCGGAGACCA GCTTCTTCTG GTACGTCGCC GTGATGCTGG CGATCTCGTT CATCGCTTCG CTAGTGATGC CGAACCCGAA GCGACACGGC TATCTCGACG GGGACGGCAC CGTGGAGGAG GCGCTGGGAC GCAAGACGAG CCCGGTTCTG GCCTGA
|
Protein sequence | MLDTSAAAPP LDEAADRRRR IMAIVGSSSG NLVEWYDFYC YAFFALYFAP VFFPEGDDTG QLLKSAAVFA VGFFMRPIGG WLFGRIADRL GRKTSLMISV LMMCGGSLAI ALLPTYATVG HLAPVLLVIA RMVQGLSVGG EYGTSATYMS EVATKGQRGF FASFQYVTLI GGQLLASLVL VVLQSVLTAE QLTAWGWRIP FVIGALAAVV ALFLRRSLSE TMSAENKDSK EAGTLSGLLK HWRAFAVVLA YTAGGSLSFY TLTTYMPKYL FNTAHIDKVT ASQITTVALF AYMAIQPFFG WLSDRIGRKT NMLLFSGLGM VMIVPLMTAI GTTTDPVLSF GLIMTGLVVI SFYTGISGIV KAELFPTQVR ALGVGLSYAV ANSLFGGTAE AVALWLKHVG AETSFFWYVA VMLAISFIAS LVMPNPKRHG YLDGDGTVEE ALGRKTSPVL A
|
| |