Gene Mchl_5084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5084 
Symbol 
ID7118958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5443122 
End bp5444093 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID643527777 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002423776 
Protein GI218532960 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.059052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAC TGGCTGTCAC CGGGGCGGGC GGATTCATCG GCGCCCACCT CACCCGCGCG 
CTCCTGGCCA AGGGGCACGA GGTCGTCGCG ATCGACAACT ACATCCGCGG ACAGGCCTCG
CGGCTCGCCA ATGCCCAGGG TGCGATCGAG CGCGTGACGC TCGACGTGCG CGACAAGGAT
GCGCTGGTCG AGGCGCTCCG GGGCGTCGAG TGCGTGTTTC ATCTGGCCGC CGTCAACGGC
ACGGAGAACT TCTACACGCA GCCGCAGCTC GTGCTCGATG TCGGCGTGCG CGGCGCGCTT
GCCGTCTCCG AAGCCTGTAT CGAGGCCGGT GTGCCCGATC TCGTCGTCGC CTCCTCGGCG
GAGGTCTACC AGACCCCGCG GGTGGTGCCG ACGGACGAGA CCATCGAGAT GGTGATCCCC
GACTCGCTCA ACCCGCGCTA CTCCTACGGC GGGTCAAAGC TGATCTCGGA ACTGATCGCC
TTCAACTATT GCCGCGACAA GTTGCGCAAG GTCCAAGTCT TCCGCCCACA CAACATCTAC
GGGCCGGATA TGGGCTGGAA GCATGTCGTG CCGCAGCTCA TCGAGAAGAT CGTCGCGGCC
GGTGACGGTG GATCGATCAC GCTCCAGGGC GACGGCAGCG AGACCCGCGC CTTCTGCTAC
GTCAGCGACG TCGTCGACGG CATCGTCCGG TTGTGGCGCG ATGGCGAGAG CATGAACGTC
TACCACATCG GCTCGATGGA GGAGGTCGCG ATCCGCGATC TCGCCCGGAT CACCGCGGAG
GCGCTCGGCA CCCGCGTCGA TCTGATCGCC GGACCGGCCG CCGCCGGGGC GACGCCGCGC
CGCTGCCCCG ACATCGGCAA GATGCAAGCG ATCGGCTACG CGCCGAGCGT TTCCCTGGTC
CAGGGCATCG AGCGCACGGT CGCGTGGTAC CGCGAGAACC CGGCGCCGAC CGATTCCAAC
CCGCTTCTGT AG
 
Protein sequence
MSRLAVTGAG GFIGAHLTRA LLAKGHEVVA IDNYIRGQAS RLANAQGAIE RVTLDVRDKD 
ALVEALRGVE CVFHLAAVNG TENFYTQPQL VLDVGVRGAL AVSEACIEAG VPDLVVASSA
EVYQTPRVVP TDETIEMVIP DSLNPRYSYG GSKLISELIA FNYCRDKLRK VQVFRPHNIY
GPDMGWKHVV PQLIEKIVAA GDGGSITLQG DGSETRAFCY VSDVVDGIVR LWRDGESMNV
YHIGSMEEVA IRDLARITAE ALGTRVDLIA GPAAAGATPR RCPDIGKMQA IGYAPSVSLV
QGIERTVAWY RENPAPTDSN PLL