Gene Mchl_4868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4868 
Symbol 
ID7114289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5181706 
End bp5183265 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content69% 
IMG OID643527561 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_002423561 
Protein GI218532745 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00138717 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCATCA CCCTCTACGT CCCGCAGGAC GCCGTCGCCC TCGGGCTCGG CGCCAACCGC 
GTCGCCCGGG CGATCTTCGC CGGCGCGGAA GCTCGCGGTC TCGACGTGCG CATCGTCCGC
ACCGGCACCC GCGGCCTGCT CTGGCTCGAG CCGATGGTCG AGGTCGCGAC CCCTGAGGGC
CGCATCGCCT ACGGTCCGGT GACCCCGGCC GATGTCGAGG GCCTGCTCGA TGCCGGGCTC
ACCGAAGGTG GGGAACACGC GCTCCGCCTT GGCAAGCCGG AAGAGATTCC GTTCCTGGCC
AAGCAGCACC GGCTCACCTT CCACCGCTGC GGCGTGGTCG ATCCGGTCTC GGTCGAGGAT
TACCGGGCCC ATGGCGGCTA CCGCGGTTTG GAGGCGGCGC TGAAGCTCGG CGCCGAGGGC
ATCGTCGCCC AGGTGCGCGA TTCGGGACTG CGCGGGCGCG GCGGCGCCGG CTTCCCGGCC
GGCATCAAGT GGAACACGGT GATGCTGGCC CAATCGGACC AGAAATACGT GGTCTGCAAC
GCCGACGAGG GCGATTCCGG CACCTTCGCC GACCGGATCA TGATGGAGGG CGACCCCTTC
AACCTGATCG AGGGCATGAC CATCGCCGCC GTCGCGACCG GCGCCACCCG CGGCTACATC
TACTGCCGCT CGGAGTACCC GCAGAGCTTC AAGACCCTGC GCGACGCCAT CGCCAACGGC
GTGCGGGCGG GCGTGCTCGG CGACAACATT CTGGGCTCCG GCAAGAGCTT CCACCTGGAA
GTGCGGCTGG GCGCCGGCGC CTATATCTGC GGCGAGGAAA CCTCGCTGCT GGAGAGCCTC
GAGGGTAAGC GCGGAATCGT CCGGGCCAAG CCCCCGATCC CGGCGCTGAA GGGCTTTCTC
GGCAAGCCGA CGCTGGTCAA CAACGTCATG ACCTTCACGG CCGTGCCGTA CATCCTGCAG
CACGGCGCCA AGTCTTACGC CGAGTACGGC ATGGGCCGCT CGCTCGGCAC CCTGCCGATC
CAGCTCGCCG GCAACATCCG GCAGGGCGGC CTGATCGAGT ACGCCTTCGG CATCACCATC
CGTCAGGTGA TCGAGGATTT CGGCGGCGGC ACGGCCTCGG GCCGTCCGGT GCGCGCGGTG
CAGGTCGGCG GTCCGCTCGG GGCCTACTTC CCCGACGATC TGCTCGACAC GCCGCTGGAT
TACGAGGCGA TGGCGGCCAA GAAGGGCCTC GTCGGCCATG GCGGCATCGT CGTGTTCGAC
GACACCGTGG ACATGGCCAA GCAGGCTCGC TTCGCCTTCG AGTTCTGCGC CACCGAATCC
TGCGGCAAGT GCACCCCCTG TCGCGTCGGC GCCACCCGCG GCGTCGAGAC CATGGACAAG
GTCATCTCCG GCATCCGCCC GGAGGCCAAT CTCAAGCTCG TCGAAGATCT CTGCGAGATC
ATGACCGACG GCTCGCTCTG CGCCATGGGC GGTCTGACGC CCATGCCCGT GATGAGCGCG
ATCACCAACT TCCCCGAGGA TTTTCGGCGC GCGGGCGATC TGCCCGTCGC GGCCGAGTGA
 
Protein sequence
MSITLYVPQD AVALGLGANR VARAIFAGAE ARGLDVRIVR TGTRGLLWLE PMVEVATPEG 
RIAYGPVTPA DVEGLLDAGL TEGGEHALRL GKPEEIPFLA KQHRLTFHRC GVVDPVSVED
YRAHGGYRGL EAALKLGAEG IVAQVRDSGL RGRGGAGFPA GIKWNTVMLA QSDQKYVVCN
ADEGDSGTFA DRIMMEGDPF NLIEGMTIAA VATGATRGYI YCRSEYPQSF KTLRDAIANG
VRAGVLGDNI LGSGKSFHLE VRLGAGAYIC GEETSLLESL EGKRGIVRAK PPIPALKGFL
GKPTLVNNVM TFTAVPYILQ HGAKSYAEYG MGRSLGTLPI QLAGNIRQGG LIEYAFGITI
RQVIEDFGGG TASGRPVRAV QVGGPLGAYF PDDLLDTPLD YEAMAAKKGL VGHGGIVVFD
DTVDMAKQAR FAFEFCATES CGKCTPCRVG ATRGVETMDK VISGIRPEAN LKLVEDLCEI
MTDGSLCAMG GLTPMPVMSA ITNFPEDFRR AGDLPVAAE