| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4812 |
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| Symbol | |
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| ID | 7118262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 5112434 |
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| End bp | 5116705 |
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| Gene Length | 4272 bp |
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| Protein Length | 1423 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643527508 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002423510 |
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| Protein GI | 218532694 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.330918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT TGCACCCGAA TGAAGTGGAG CGCTTGAAGG CGCTATCTGA ACTGGGTGTA
TTCGGCTCTG GTCCGGAGCC GCAGTATGAC GCGATCTGCC GGACGGCTCA GGCACTGTTC
GATGTGCCCA TCGCCTACGT TTCGCTCGTT GGCGAGACCG AGCAGCGCTT CAAGGGCAAG
TGTGGCCTCG GGGCGGAAGC AACCCCACGT GAGATCTCGT TCTGCACCTA CACCATCCTG
TCGCACGAGG TGCTGGTGGT TGAGGACGCC ACACAGGATG AGCGCTTTTC TGCCAACCCG
CTCGTCATAG GCAAGCCGCA CATTCGCTTC TATGCCGGTG CACCTCTCGT GCTCAGCTCC
GGCATTCACC TCGGCTCGTT GTGCCTTATT GACCGGGTGT CACGCCCCTT CTCAGCCGAA
CAGCAGGAGC GGCTACGAGA CCTGGCTCAG ATCGTTGTCG TTCAACTTCG CTTGAGCAAA
GCAGAGCGCA ATGCTCGGGA GAGCGCAGCC GACTACCGCC TACTGGCCGA CAACACCAAT
GATACGATCA TCCGCTCCGA TCTGGATGGC ACACTCCGCT ACGTCTCGCC AGCGGTCAGC
CGGCTTCTTG GCTACGAGCC GCACGAACTC TTCGGCACTC ACCCGCTCGC TTCTGTTCAC
CCGGACGAAG CCAGCGGCTA CGGGCAACTG CTGGAGCAGA TCGGGACTGG ACAGATCAGC
AAGGCTGTGA CGCAGCAGCG CTACCGCCGC CGAGATGGCA CCTACGTATG GGTGGAGATC
TCCTTCAACC TTACTCGCGA GGAGGAATCA GGAGAGCCGA ATGGCTATGT GGCCGTCATA
CGTGACGTCT CACAGCGTAA GGCTGCCGAG AGCGAGATGG CGCACATCGC ACGCCATGAT
CCGCTTACCG GCCTGCCCAA CCGGCTGCAC TTCCGCGAAC AGCTTGAGCA GGAGATCCGG
CGCACGAAGC GGACGGGCAG CACGTTTGCG CTGCTCTGCC TGGATCTTGA CCGTTTCAAG
CTCGTCAACG ACAGCCTCGG CCACCAAGCT GGCGACCAAC TGCTGAAGGT CGTGGCGCAG
CGGATCAGGT CCGTCCTGCG CACGGAGGAC ACGGTTTCGC GGCTTGGTGG CGACGAGTTT
GTCATCATCC AGACCAACTG CGCACGCGCT GAGGATGCGA GCCGGCTTGC AGAGCGATTG
ATTGCAGCGA TGTTACCGCC GGTGGACCTT GGCGGCTACC CAGCCGGTAT AGGGGTCAGC
ATCGGCATTG CCTTAGCTCC ACGAGACGGT CTGGATCACG ATCACCTCTA CGCACGCGCC
GATCAGGCCC TCTACCGCGC CAAGGACGCC GGCCGAAACA CATTCCGGCT CTACGCCGAG
GAAGAAGTCG GTTGTAGCCG TATGTTTAAC CAGAGTGGCG AGTGGGAGGT GGGCCAGCCG
CTCAGGCAGA TCACGCCAGA CCCGCTGCTG GTAGGCGACC TTTTGCGCGA CATTCTGGAG
AGCAGCAGCG ATTGTATGAA GCTGCTCGAT CAGGACGGAA ACCTGCTCTT CCTCAGCGCG
GGCGGGCTGA AGGTGATGGA GATCGACGAT GTCCGGCCGT TTCTCGGTCA GTCGTGGGTC
GAGTTGTGGC AAGGTGAGCA TCGTGCCGCA GCGAAGAGAG CGGTGGCGCA GGCGAGTCGC
GGGCAGGAGG CCCGTTTCCG CGGCTTCTGC CACACGGCTA AAGGTCGGCC GAGATGGTGG
GACGTGGCTC TCAGCCGACT TAAGTCTCTG AGCGGCGCGC GCGGTCTGAT CCTGGCCATC
TCGCGCGATA TCACGGCACA GGTTGAGCTT GAGAGCGACC TGCAAACCAC AGCGAGCCGC
TATAAGGCGC TCATCGAAGC AAGTGCGACC ATGGTCTGGC GGGCAACGTC GGACGGCTCG
CTTATCGAGA GCAGCGGGTG GGAAGCCTAC ACGGGTCAGT CGGAGAGCGC CTACAGCGGC
CACGGCTGGC TGAACACCGT TCATCCTGAT GATCTGCACC GCGTGACCTC CACGTGGCAC
GAGATTTTTG CCTCTCGAAC GGCAGGCTCC TTCGAGTTCC GTGCCCTGTG CGCAGACGGA
ACGTACAGGT GGACGCTGAC CAGGGCTACG CCGCTCAAGG ATACCGCTGG TCAGGTCCAG
GAGTGGGTCG GAACCGATAG CGACATCCAT GAGAGCAAGC AGGCTACTGA AGCAATCCGC
CTTCAGGAAG AACGCTACCG CTTGGCCATG CTCGCCACAC AGGATGCGAT CTGGGATCAC
GACATAACAT CGGACACCAT CACGTGGAGC GAGGGCGCTC ACCCGCTGTT CGGCTACTCT
GACGCTGGAA TTGCTAGCAC AGGAGCTTGG TGGAGGAGCA AGATCCACCC TGATGATCGA
GATCGCGTCA CAGCCTCACT TAAAGAGTTC ATAGACGGTC GAGAGAGCCG CTGGAGCGAG
GAGTATCGTT TCGCCCGCGC TGATGGTAGC TACGCGGCGG TAATTGACCG GGGGTTCGTG
ATCCGCGACG CTGAGGCGCA AGCCGTGCGC GCGGTCGGAG CGATGCGCGA TATCACCGAG
CAGCGACGAG CAGACTCGGC GCTACGCGCC AGCGAGGAGC GCCTGCGGCT TGCCTTGCAT
GCCGGTCGGA TGGTTGCATG GGAGCGCAAC CTGAGGACGG GCCGCACCAC TCGATCTGAA
AACTCGCTGG ACCTATTCGG TATCGGGTCG GGATCTGCCT CGCAGTTCCT CGACCGCGTT
CATCCAGATG ATCGCGGACG TACAGAGCGG CTTGTCCAGC AGGGCAGCCA GAGACGTGAG
CAGCGGGAAT TCCGCTATAT CCACCCAGAC GGACGCTTGA TCTGGCTCGC TTCGGCGGTT
GAGCGCGTCG ATGCTGACCG CCTCGTCGGC ATCACCTTCG ACATTACCGA GCGTAAGTGC
GCTGAAGAGC AGGCCTGGCG CGCAGCCAAT CACGACGCGC TCACTGGCTT GCCGAACCGC
CGGCTATTCC GCCAGCGGCT GGAGCAGGCA CTTACTTCTG CCGAGTGCGG CGGCGCGAGT
GTGAGCTTGC TTCTGTTAGA CCTCGACCAT TTGCGCGACG TGAACGACAC CCTCGGGCAT
GACGCGGGGG ATACTGTGCT AATGGAGGTT GCTCAGCGAT TGCAAGACGG CTTGCGCGCC
ACGGACACGG TGGCACGCCT CGGCGGTGAC GAGTTCGCCT TGCTGCTCGC AGAGCCTATG
CGCATGGACC AGGCCGTCAT TCATGCAAGA GCGCTCATTG AACGTCTAAG GCAGCCATTC
TGCCACCGCG GTCACATGCT CTCCTGCAAA GCCAGCATCG GCCTTGCGGC CTATCCTGAT
CACCATCATG AGTCGCACGA ACTCATGAAG GATGCGGACA TCGCGCTCTA CCATGCCAAG
GCAAAGGGCC GTAATGGCGT CGTTGTGTTC GCACCGGAGA TGCGGGCAGA GACGGAGCGG
CGAGTCCAGA TTGCGTCCGA GGTACAAACC GCGGTTGTGG CGGGCCATAT CGTGCCTTTC
TATCAGCCGA AGGTGTGTTT CTCGACCGGA GCGATCGTCG GCTTCGAGGC GCTGGCGCGT
TGGCAACATC CTGAAAGAGG GCTGCTCACA CCCGGCTATT TCGGTTCGGC TTTCGATGAT
CCAGAGCTTG CAACAGCCAT CGGGGAGTCC ATCCTCCGAC AGGTTGCGTG CGACCTGCGC
GAGTGGCAGG AGCGCGGTCT TGCTCCCGGC CGAGTTGCCG TGAATTTTTC CTCGGCAGAG
TTCCGCAAGG CTGATCTGGC AGCAACCATC CTGATCGTTT TGGATGAATA CGATGTTCCG
GCGAACCTAT TCGAGGTGGA GGTAACCGAG ACGGTATTCC TCGGAAATGG CACCGAGAAC
GTGCCTGCTA CCCTCCAACA GCTACAAGAT GCCGGCGTTC TGATAACGCT TGATGATTTC
GGCACCGGTT TTGCTTCGCT GACACACCTG AAGCAGTTTC CTGTCGGCCA CCTTAAGGTC
GATCAGAGTT TCGTGCGCAA CATGGAGCAG GATAAGGGCG ATGCGGCCAT TGTCGCGGCG
GTGGTTGGAC TTGGCCGCAG TCTAGACATG AAGGTTACGG CCGAAGGTGT TGAGACAGCC
GGCCAGGCAA TACGCCTCAG GGAGATGGGC TGCGATTACG CTCAGGGTTA CCGCTACAGC
AAACCGATGG CCAGCTCTCG CGTGCCCTGG TTCCTGCGGA ACTGGAACAG TGAGGCCGTC
AGGAGTAGCT GA
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| Protein sequence | MLPLHPNEVE RLKALSELGV FGSGPEPQYD AICRTAQALF DVPIAYVSLV GETEQRFKGK
CGLGAEATPR EISFCTYTIL SHEVLVVEDA TQDERFSANP LVIGKPHIRF YAGAPLVLSS
GIHLGSLCLI DRVSRPFSAE QQERLRDLAQ IVVVQLRLSK AERNARESAA DYRLLADNTN
DTIIRSDLDG TLRYVSPAVS RLLGYEPHEL FGTHPLASVH PDEASGYGQL LEQIGTGQIS
KAVTQQRYRR RDGTYVWVEI SFNLTREEES GEPNGYVAVI RDVSQRKAAE SEMAHIARHD
PLTGLPNRLH FREQLEQEIR RTKRTGSTFA LLCLDLDRFK LVNDSLGHQA GDQLLKVVAQ
RIRSVLRTED TVSRLGGDEF VIIQTNCARA EDASRLAERL IAAMLPPVDL GGYPAGIGVS
IGIALAPRDG LDHDHLYARA DQALYRAKDA GRNTFRLYAE EEVGCSRMFN QSGEWEVGQP
LRQITPDPLL VGDLLRDILE SSSDCMKLLD QDGNLLFLSA GGLKVMEIDD VRPFLGQSWV
ELWQGEHRAA AKRAVAQASR GQEARFRGFC HTAKGRPRWW DVALSRLKSL SGARGLILAI
SRDITAQVEL ESDLQTTASR YKALIEASAT MVWRATSDGS LIESSGWEAY TGQSESAYSG
HGWLNTVHPD DLHRVTSTWH EIFASRTAGS FEFRALCADG TYRWTLTRAT PLKDTAGQVQ
EWVGTDSDIH ESKQATEAIR LQEERYRLAM LATQDAIWDH DITSDTITWS EGAHPLFGYS
DAGIASTGAW WRSKIHPDDR DRVTASLKEF IDGRESRWSE EYRFARADGS YAAVIDRGFV
IRDAEAQAVR AVGAMRDITE QRRADSALRA SEERLRLALH AGRMVAWERN LRTGRTTRSE
NSLDLFGIGS GSASQFLDRV HPDDRGRTER LVQQGSQRRE QREFRYIHPD GRLIWLASAV
ERVDADRLVG ITFDITERKC AEEQAWRAAN HDALTGLPNR RLFRQRLEQA LTSAECGGAS
VSLLLLDLDH LRDVNDTLGH DAGDTVLMEV AQRLQDGLRA TDTVARLGGD EFALLLAEPM
RMDQAVIHAR ALIERLRQPF CHRGHMLSCK ASIGLAAYPD HHHESHELMK DADIALYHAK
AKGRNGVVVF APEMRAETER RVQIASEVQT AVVAGHIVPF YQPKVCFSTG AIVGFEALAR
WQHPERGLLT PGYFGSAFDD PELATAIGES ILRQVACDLR EWQERGLAPG RVAVNFSSAE
FRKADLAATI LIVLDEYDVP ANLFEVEVTE TVFLGNGTEN VPATLQQLQD AGVLITLDDF
GTGFASLTHL KQFPVGHLKV DQSFVRNMEQ DKGDAAIVAA VVGLGRSLDM KVTAEGVETA
GQAIRLREMG CDYAQGYRYS KPMASSRVPW FLRNWNSEAV RSS
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