Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4598 |
Symbol | |
ID | 7117994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 4874725 |
End bp | 4876323 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643527296 |
Product | protein-export membrane protein SecD |
Protein accession | YP_002423300 |
Protein GI | 218532484 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.278601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.122779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCT TCTCGAGAAC CAAGATTTTC GCGACCCTGG CCATCATCCT GATCGGTCTG AGCCTCGCAG TGCCGAGCTT CTTCTCGAAG GAGCAGCGCG AGGCCTTCGT CAACGCGCTG CCGAAATCGA TCCAATGGAT GGTGCCGACC CGGGCGATCG TGCTCGGCCT CGACCTCCAG GGCGGCTCGC AGATCCTGCT GGAAATCGAC CAGCCCGACC TCGTCCGCTC GATGGTCACC GGCCTGCGCG ACGACGTGCG CCGCATCCTG CGCGAGGCCG CGGTCTCGCC GGACGGCGGC ATCCGCGTCA TCAACCGCGG CGTCGAGCTG CGCATCCCCG ATGCGGCGGC CCGCGCGAAG GTGATGCCGA AGCTGCGCGA ACTCGCAGCC CCCATCAACA ACCCGCTCGC CGCCGGCGGC CAGACCCTCA CCGTCAACGA GGCCGAGAAC GGCACGATCC AGCTCGTCCT CACCGAGGCC GGCATCAACG ACCGCACCCG CCGCGCCGTC AGCCAGGCCA TCGAGGTCGT GCGCAAGCGC ATCGATTTCG GCGGCACCAA GGAGCCGTCG ATCCAGCAGC AGGGTGCCAG CCGCATCCTC GTCCAGGTGC CGGGCCTGCA GAACCCGCAG GAGCTGGAGG ACCAGCTCGG CAAGACCGCC AAGCTCGAAT TCCGGATGCT GGCCGATTCG CCCTCGGGCG ACGTCGACAT GCTCACCTCC AAGGACGAGG GCGGCGCCAA GGTGCCGGTC GAGCGCCGGG TCATGGCCGA TGGCAGCGAT CTCACCGACG CCCAGCCCGC CTTCGACCCG CAGACCCACG AGCCGATGGT GAGCTTCAAG TTCAACCTGC GTGGCGCCCA GCGCTTCGGT CAGGCGACCT CGGAGAATGT CGGCCGGCGC ATGGCGATCG TGCTCGACAA CGTGATCCAG TCGGCCCCTG TGATCCGCTC GGCGATCACC GGCGGTACCG GCCAGATCAC CGGCAACTTC ACCGTCAAGG ACGCCAACGA CCTCTCGGTG CTGCTGCGGG CCGGCGCGCT GCCGGCCAAG CTTACCGTGG TCGAGCGCCG CGTCGTCGGT CCCGGCCTCG GCCGCGACTC GATCGAGGCC GGCAAGATGG CGACCCTGGT CGCGGGCGGC CTCGTCATTG CCTTCATGTT CGCGACCTAC GGCACCTTCG GCTTCATCGC GAACATCGCC CTGATCGTGC ACGTCGGCCT GATCCTCGGC CTGATGTCGG TGCTGGAGGC GACGATGACG CTGCCGGGCA TCGCCGGCAT CGTGCTCACC ATCGGCACGG CGGTCGATTC GAACGTGCTG ATCTACGAGC GCATGCGCGA GGAAGCCCGC GGCGGACGCT CCCTGGTCTC GGCGCTTCAG GCCGGCTTCG ACCGGGCGTT CGCCACCATC ATCGACTCGA ACTCGACCAT GGCGATCGCC GCCCTGCTCC TGTTCTTCAT GGGCTCGGGC CCGGTGAAGG GCTTCGCCGT GGTGTTCATC CTCGGCATCC TCACCACCGT TATCACCGCC GTGACGCTGA CGCGCATGAT GATCGCGCTG TGGTACAACT GGTTCCGGCC CAAGGCCCTG CCGTTCTAG
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Protein sequence | MLRFSRTKIF ATLAIILIGL SLAVPSFFSK EQREAFVNAL PKSIQWMVPT RAIVLGLDLQ GGSQILLEID QPDLVRSMVT GLRDDVRRIL REAAVSPDGG IRVINRGVEL RIPDAAARAK VMPKLRELAA PINNPLAAGG QTLTVNEAEN GTIQLVLTEA GINDRTRRAV SQAIEVVRKR IDFGGTKEPS IQQQGASRIL VQVPGLQNPQ ELEDQLGKTA KLEFRMLADS PSGDVDMLTS KDEGGAKVPV ERRVMADGSD LTDAQPAFDP QTHEPMVSFK FNLRGAQRFG QATSENVGRR MAIVLDNVIQ SAPVIRSAIT GGTGQITGNF TVKDANDLSV LLRAGALPAK LTVVERRVVG PGLGRDSIEA GKMATLVAGG LVIAFMFATY GTFGFIANIA LIVHVGLILG LMSVLEATMT LPGIAGIVLT IGTAVDSNVL IYERMREEAR GGRSLVSALQ AGFDRAFATI IDSNSTMAIA ALLLFFMGSG PVKGFAVVFI LGILTTVITA VTLTRMMIAL WYNWFRPKAL PF
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