Gene Mchl_4501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4501 
Symbol 
ID7118466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4769777 
End bp4770778 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID643527200 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002423205 
Protein GI218532389 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.134293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC GTATCCTCGT GACGGGTGGG GCCGGTTTTG TCGGCAGCCA TCTGTGCGAT 
CGACTGGTGG CGCAGGGACA CGACGTGCTC GCGGTCGATA ATTTCTACAC GGGCGACCGG
TCGAATCTCG CCCAGCACCT GAGCAATCCG CGCTTCGAGG TCATGCGCCA CGACGTGACC
TTCCCGCTCT ATGTCGAGGT GGACGAGATC TACAATCTCG CCTGCCCCGC CTCCCCGATC
CACTATCAGC GCGACCCGGT GCAGACCACG AAGACGAGCG TGATCGGGGC CATCAACATG
CTCGGGCTCG CCAAGCGGCT CGGCATCCCG ATCCTCCAGG CCTCCACCAG CGAGATCTAC
GGCGATCCGG ACGTGCACCC GCAGCCGGAG GATTATCGCG GCCTCGTCAG CGTCAGCGGC
CCGCGCGCCT GCTACGACGA GGGCAAGCGC TGCGCCGAGA CCCTGTTCTT CGACTACCAG
CGCCGGCACC ACGTGCCGAT CCGCGTGGCA CGCATCTTCA ACACCTACGG GCCGCGGATG
AACCGCGACG ACGGCCGGGT CGTCTCGAAC TTCGTGGTGC AGGCGCTGCG GGGCGAGCCG
ATCACCCTCT ACGGCGACGG CCGCCAGACC CGCGCCTTCT GCTTCGTCGA CGACCTTGTC
GAGGGGCTGA TGCGCCTGAT GAACGTCGAG GGTACCCTCG ACGGCGCGGT CAATCTCGGC
AACCCGACCG AGGTGACCAT CGCCGAGATC GCCCATCGGA TCATCGCGCT CACCGGCTCG
CGCTCGGAGA TCGTCTACCG CCCGCTGCCG CAGGACGACC CGCGCCAGCG CTGCCCCGAC
ATCACCCGGG CAAAGGCGAT GCTGCACTGG ACCCCGAAGG TCGGGCTCGA CGAGGGGCTG
ACGCGGACGA TCGCCTATTT CGAGGCGCTG CTCTCGGCCT CCGGCTCGAG CGTGACGCCG
TTCGAGCCGG CGCTGCCCGA ACTCGCGAAG ACCGGCTCAT GA
 
Protein sequence
MKKRILVTGG AGFVGSHLCD RLVAQGHDVL AVDNFYTGDR SNLAQHLSNP RFEVMRHDVT 
FPLYVEVDEI YNLACPASPI HYQRDPVQTT KTSVIGAINM LGLAKRLGIP ILQASTSEIY
GDPDVHPQPE DYRGLVSVSG PRACYDEGKR CAETLFFDYQ RRHHVPIRVA RIFNTYGPRM
NRDDGRVVSN FVVQALRGEP ITLYGDGRQT RAFCFVDDLV EGLMRLMNVE GTLDGAVNLG
NPTEVTIAEI AHRIIALTGS RSEIVYRPLP QDDPRQRCPD ITRAKAMLHW TPKVGLDEGL
TRTIAYFEAL LSASGSSVTP FEPALPELAK TGS