| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4402 |
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| Symbol | |
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| ID | 7117716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 4652883 |
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| End bp | 4654574 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643527101 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002423106 |
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| Protein GI | 218532290 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.377329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC TCGCCGCTCC GTCGCTGTCG ATCGCCCTGC CGTTCGAGGC GGCGCTGGCC
GAGATGGCCG CGCCCCTGCT CCTGCTCGAT GCGGGCGGCA GCGTCGTCTT CGCCAATGCC
CACGCGGCGG CCTTGCTCGC CTGCGCCGAA CCGGTCGGCC TTCCCCTCAC CGCCCTGCTG
GTGCCCTTCG GCGCCGCGGA GCCGGAGGCC GAGCCCATCC TAGAGGCTGT GCGCGCCGCC
CGCCCCGTCC GGGCGCGGCT CACCCTCGGC GGCGACCGCC GCGTCGAGGC GGCGCTGGCG
CCGCTCTCGG CCGGCGGCTT CGCCCTCACC TTCGAGGACG TGACCGAGCA ACTCCGCGGC
GCGGCCCTGG CCCGGCAGGA GCCGCTCACC GGCCTGTGCA ACCGCGTCGG CCTGCACGAC
CGCCTCGACG CGGCGCTGAC CGAGGCGGCC CGGACGGGGG CACCGCTCGC GGTGCTGATG
CTCGACCTCG ATCGGTTCAA GACGGTCAAC GACACCCTCG GGCATCCGGT CGGCGATGCG
CTCCTGCGCA AGGTCGCCGA GCGCCTGCGC CGGGCCACCC GCAGCGGGGA TCTGGTCGCA
CGGCTCGGCG GCGACGAGTT CGCCATCCTT CAAGTCGATC CCCAAGTTGG ACCCCATGCT
GGCGTCGAGC AGCCGCACGC GGCCGAGGCG CTGGCACGCC GCCTCGTCGA TCTCGTCGGG
CGCACCTACG TCGTCGATGG CCACATGCTC AATGTCGGCG TCAGCGTCGG CGTCGCCATC
GCCCCCGCCG ACGGCCAGAA CGCCGACGAC CTGCTGAAAC ACGCCGACCT CGCGCTCTAC
CGGGCCAAGG CCGCGGGCCG GGGCACCTAC CGCTTCTTCG AGCCGGCGAT GAACGCGCAG
ATGCAGGCGC GCCGCGGCCT GGAGATCGAC CTGCGCCGGG CAATGGCCCT CAAGCAGTTC
GACCTCGCCT TCCAGCCGCA AATCCAACTG GAGAGCGGGG ACGTGACGGG CTTCGAGGCG
CTGCTGCGCT GGAACCACCC CGAGCGCGGA CCGGTGTCGC CGGCCCTGTT CATTCCGTTG
GCCGAGGAGA TCGGCGTCAT CGTCGGCATT GGCGAGTGGG TGTTGCGCAC CGCCTGCCGC
GAGGCGGCGC GCTGGCCGCA CCCCGCATCG ATCGCCGTGA ACCTCTCGCC CGTGCAGTTC
CGCGGCGGCC GGCTGGTCGA GACGGTGACG AACGTGCTGG CCCAGACCGA CCTCGACCCG
GCCCGGCTGG AACTGGAGAT CACCGAAGGC GCGCTCCTCG AGAACACCGA CAGCGTGCTC
GACGTGCTGA ACGGCCTGCG CGCGCTCGGC GTGAAGATCT CCATGGACGA TTTCGGCACC
GGCTACTCGT CCTTGAGCTA CCTGCAGAAA TTCCCCTTCG ACAAGATCAA GATCGACCAG
TCCTTCGTCC GCGGCATGGA GGGCAATGCC GAGTGCGGGG CGATCGTGCG GGCCATCGCC
CGGCTCGGCG CCAGCCTCGG CATGCGCACC ACCGCCGAAG GGGTCGAGAC GGCGACGCAG
CTCGACGCCA TCCGCGCCGA GGGCTGCACC GAGGTCCAGG GCTACCTGAC CGGACGCCCG
ATGCCGGCCG CCCAGGCCGC CGCCCTGTTG TCCGCCTCGC CCGCTCCCTC GCCCTCGACC
TTGCCCGCCT GA
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| Protein sequence | MSALAAPSLS IALPFEAALA EMAAPLLLLD AGGSVVFANA HAAALLACAE PVGLPLTALL
VPFGAAEPEA EPILEAVRAA RPVRARLTLG GDRRVEAALA PLSAGGFALT FEDVTEQLRG
AALARQEPLT GLCNRVGLHD RLDAALTEAA RTGAPLAVLM LDLDRFKTVN DTLGHPVGDA
LLRKVAERLR RATRSGDLVA RLGGDEFAIL QVDPQVGPHA GVEQPHAAEA LARRLVDLVG
RTYVVDGHML NVGVSVGVAI APADGQNADD LLKHADLALY RAKAAGRGTY RFFEPAMNAQ
MQARRGLEID LRRAMALKQF DLAFQPQIQL ESGDVTGFEA LLRWNHPERG PVSPALFIPL
AEEIGVIVGI GEWVLRTACR EAARWPHPAS IAVNLSPVQF RGGRLVETVT NVLAQTDLDP
ARLELEITEG ALLENTDSVL DVLNGLRALG VKISMDDFGT GYSSLSYLQK FPFDKIKIDQ
SFVRGMEGNA ECGAIVRAIA RLGASLGMRT TAEGVETATQ LDAIRAEGCT EVQGYLTGRP
MPAAQAAALL SASPAPSPST LPA
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