| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4353 |
|---|
| Symbol | |
|---|
| ID | 7116516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4597793 |
|---|
| End bp | 4599352 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643527051 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_002423057 |
|---|
| Protein GI | 218532241 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.807247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCG CCGATCTTGG ACTGAGCGAC AAGGTACTCC AAGCCGTCAC CACGGCCGGC
TACACCGAGC CGACGCCGAT CCAGGCCCAG GCGATCCCGC ATGTGCTCGC CCGGCGCGAC
GTGCTCGGCA TCGCCCAGAC CGGCACCGGC AAGACCGCCG CCTTCACCCT GCCGATGCTG
ACCATGCTGG AGACCGGCCG CGCCCGGGCT CGCATGCCGC GCACGCTCAT CCTGGAGCCG
ACCCGCGAAC TCGCGGCGCA GGTCGAGGAG AATTTCGAGC GCTACGGCAC CAACCACAAG
CTCAACGTGG CGCTCATCAT CGGCGGCGTC TCTTTCGCCG ACCAGGACGC CAAGCTCACC
CGCGGCACCG ACGTGCTGAT CGCGACGCCG GGGCGCCTGC TCGACCATTT CGAGCGCGGC
AAGCTGCTGC TGACCGGCGT CGAGCTTCTC GTCATCGACG AGGCCGACCG GATGCTCGAC
ATGGGGTTCA TTCCCGACAT CGAGCGCATC GTGAAGATGG TGCCCTTCAC GCGCCAGACG
CTGTTCTTCT CCGCGACGAT GCCGCCGGAG ATCGAGCGGC TGGCCGACAT GTTCCTGCAC
AACCCGCAGC GGGTCGAGGT GGCGCGTCCC GCCTCCACCG CCACGACCAT CGAGCAGCGC
CTCGTGGCGA CGGGCGCGGA GGGCCATGAG AAGCGCAAGG TGCTGCGCCA TCTCATCCGC
TCGGCGAGCG AGCTGCAGAA CGGCATCATC TTCTGCAACC GCAAGCGCGA CGTCGCCCAG
CTTCAGCGCT CGCTGACCAG CCACGGCTTC AACGCGGCAG CACTCCACGG CGACATGGAC
CAGCGCGCCC GCATGGCCGC CCTCGACGGC TTCCGCAGCG GCGAGGTTCC GCTGCTGGTG
GCCTCGGACG TCGCCGCGCG CGGCCTCGAT ATCCCCGCCG TCAGCCACGT CTTCAACTTC
GACGTGCCGC ACCACCCGGA GGACTACGTC CACCGGATCG GACGCACCGG CCGCGCCGGC
CGCTCGGGCC AGGCCTTCAC CCTCGCGAGC CGAAGCGACG AGCGCTCGCT CTCGGCGATC
GAAAGCTTGA TCGGTCAGCC GATCGCTTGG CTCGACGGCG ATCTTGCCAG CGTCTCCGAC
GAGGTGGAGG GCGACGAGCC GCGCCGCCGC CGCGGCAGCC GCCGGGCCAA GGAAACAAAG
GGGGGCGAGG AAGCCAAGAG CGGCGGGCGC AGCACCGAGC GGAGTGCCGC CCCGTCGAGC
GAAAGCCCCC GCAGCGAGAA CCGCTCCCGC GGAGGTCGCC GTCCGGCCGC CGAGCGCAGC
CGCGCCGACG CGCCCCGGCG AGACCCGGTG CGTGAGCCGG AACCGGTTGC GGTTGCCCCT
CCCGCTCCTC TTGCCCCTCC CCGCGAGTTG GCCCGCGAGC CCGTCCGGAG CGCCCCTGAA
CGCGCGCGCG GCGAGCGTCG TCCCCCGCGT CGCGACGAGG ACGGCGAGAC GCCGGTCGGC
CTCGGCTCGC ACGTCCCGGC CTTCCTGCTG AAGCCGACCG GGTTCGGGAA GAGCAAGTAG
|
|---|
| Protein sequence | MSFADLGLSD KVLQAVTTAG YTEPTPIQAQ AIPHVLARRD VLGIAQTGTG KTAAFTLPML
TMLETGRARA RMPRTLILEP TRELAAQVEE NFERYGTNHK LNVALIIGGV SFADQDAKLT
RGTDVLIATP GRLLDHFERG KLLLTGVELL VIDEADRMLD MGFIPDIERI VKMVPFTRQT
LFFSATMPPE IERLADMFLH NPQRVEVARP ASTATTIEQR LVATGAEGHE KRKVLRHLIR
SASELQNGII FCNRKRDVAQ LQRSLTSHGF NAAALHGDMD QRARMAALDG FRSGEVPLLV
ASDVAARGLD IPAVSHVFNF DVPHHPEDYV HRIGRTGRAG RSGQAFTLAS RSDERSLSAI
ESLIGQPIAW LDGDLASVSD EVEGDEPRRR RGSRRAKETK GGEEAKSGGR STERSAAPSS
ESPRSENRSR GGRRPAAERS RADAPRRDPV REPEPVAVAP PAPLAPPREL AREPVRSAPE
RARGERRPPR RDEDGETPVG LGSHVPAFLL KPTGFGKSK
|
|---|
| |