Gene Mchl_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4054 
Symbol 
ID7118059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4273614 
End bp4274156 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content70% 
IMG OID643526773 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002422782 
Protein GI218531966 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGACG GGACCGACCT CATGGCGGGA GGGGCGGCGG GGGTGTCGAT CGATGCCCTC 
TACCGTCACG AGGGGCTGAA GCTCCGGCGT TTCCTCCAGC GCCTGCTCGA CAACCCGGCC
GACGCCGCGG ATGCGAGCCA GGAAACCTAC CTGCGCATGG TCGCCGCGCT CTCGCGCACG
AGCATCGAGC ACCCCTCGGC CCTGCTGTTC CGCATCGCCA CCAACGTCGC CCTGCGGATG
CGCAACCGCG GCCGGCTGGA GCGGATTCTG TTCGCGGCGA AATGCGAGGC GGAACTCGCT
GAGATCGCCG ACGGCTACGC CCTCCCCGAG CGGCAGACGA TCGCCCGCCA GGAGCTGAAG
CGCCTCGCCG CGGCGATCGA CGCCTTGCCG CCCCGCTGCC GCGAGGTGTT CCTGCTCAGC
CGCCTCGACG GCCTCGCGAA CGGCGAGATC GCGCAGCGCC TCGGCATCTC GCGCAACATG
GTCGAGAAGC ACATCATCAA GGCCCTGCTG CATTGCCGGC GCAGCCGCCT CGATCTTTTT
TGA
 
Protein sequence
MGDGTDLMAG GAAGVSIDAL YRHEGLKLRR FLQRLLDNPA DAADASQETY LRMVAALSRT 
SIEHPSALLF RIATNVALRM RNRGRLERIL FAAKCEAELA EIADGYALPE RQTIARQELK
RLAAAIDALP PRCREVFLLS RLDGLANGEI AQRLGISRNM VEKHIIKALL HCRRSRLDLF