Gene Mchl_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4001 
Symbol 
ID7117200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4211749 
End bp4212633 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content66% 
IMG OID643526724 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_002422733 
Protein GI218531917 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCA TCGTGCTCGC CGGCGGCTCC GGCACCAGGC TCCATCCGGC CACGCTGGCG 
ATCAATAAGC AGCTGCTGCC GGTCTACGAT AAGCCGATGA TCTACTACCC GATCTCGGTG
CTGATGCTCG CCGGCATTCG CGAGATCCTC GTCATCTCCT CGCCGGAGCA TCTCGGCAAC
TACCAGCGCC TGCTCGGCAC CGGTGAGCAG TTCGGCGTCA CCTTCACCTA CGCCGTGCAG
CCGCGGCCCG AAGGGCTGGC CCAGGCCTTC ATCATCGGCC GGGACTTCGT CGGCAGCGAC
GACGTGGCGC TGGTGCTCGG CGACAACCTG TTCTTCGGCA ACGGCATGAG CGACCTGCTC
GCCAAGGCGC GCACCCGCAA GAGCGGGGCA ACGGTGTTTG CCTACCACGT CGATCATCCG
GAGGCCTACG GCGTCGTCAC CCTCGACGAG TCCGGCCGGC CCTTGCGGCT GGTGGAGAAG
CCCAAGACCC CCGAGAGCCC CTGGGCGGTG ACGGGGCTGT ACTTCTACGA CAATCAGGTG
CTCGACATCG CCGCGGAGGT GAAGCCCTCG GATCGGGGCG AACTCGAGAT CACATCCGTC
AACCAGGCCT ATCTCGAACG CGGCCAGCTC CATGTCGAAC GGATGAGCCG CGGCTACGCC
TGGCTCGATA CGGGGACGCA TGACAGCTTG CTGGAGGCGG GTGAGTTCGT GCGGGTGCTG
CAGCGCCGGC AAGGACTTCA GGTCGCCTGC CTCGAAGAGA TTGCCTACCT GCAGGGCTTC
ATCGGCCGCG AGCAGTTGCA GGCGCGCGGT GAGCTGTTCG CCAAAACTAG CTACGGCCAG
AACCTGCTGC GCCTCGCCCG CGAGGGCCAC CTTAGCATAG CCTAA
 
Protein sequence
MKGIVLAGGS GTRLHPATLA INKQLLPVYD KPMIYYPISV LMLAGIREIL VISSPEHLGN 
YQRLLGTGEQ FGVTFTYAVQ PRPEGLAQAF IIGRDFVGSD DVALVLGDNL FFGNGMSDLL
AKARTRKSGA TVFAYHVDHP EAYGVVTLDE SGRPLRLVEK PKTPESPWAV TGLYFYDNQV
LDIAAEVKPS DRGELEITSV NQAYLERGQL HVERMSRGYA WLDTGTHDSL LEAGEFVRVL
QRRQGLQVAC LEEIAYLQGF IGREQLQARG ELFAKTSYGQ NLLRLAREGH LSIA