Gene Mchl_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3778 
Symbol 
ID7116972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3991330 
End bp3992058 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID643526513 
Productacetoacetyl-CoA reductase 
Protein accessionYP_002422525 
Protein GI218531709 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.576302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.884276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG AACGCGTCGC CCTCGTCACG GGCGGAACGC GCGGCATCGG CGCCGCGATC 
TCCAAGCGCC TGAAGGACAA GGGTTACAAG GTCGCCGCCA ATTACGGCGG AAACGACGAG
GCGGCCAACG CCTTCAAGGC CGAGACCGGC ATCCCGGTGT TCAAGTTCGA CGTCGGCGAT
CTCGCAAGCT GCGAGGCCGG CATCAAGGCG ATCGAGGCCG AAGTCGGCCC GATCGACATC
CTCGTGAACA ACGCCGGCAT CACCCGCGAC GGCGCCTTCC ACAAGATGAC CTTCGAGAAG
TGGCAGGCGG TGATCCGCAC CAACCTCGAC TCGATGTTCA CCTGCACCCG TCCGCTGATC
GAGGGAATGC GCTCGCGCAA TTTCGGGCGC ATCATCATCA TCTCGTCGAT CAACGGCCAG
AAGGGCCAGG CCGGCCAGAC CAACTACTCC GCGGCCAAGG CCGGCGTGAT CGGCTTCGCC
AAGGCGCTGG CGCAGGAGAG CGCCTCGAAG GGCGTTACCG TGAACGTGGT GGCCCCCGGC
TACATCGCCA CCGAGATGGT GATGGCGGTG CCGGAAGACA TCCGCAACAA GATCATCTCG
ACAATCCCGA CCGGCCGCCT CGGCGAGGCC GACGAGATCG CCCATGCGGT CGAGTACCTC
GCCAGCGACG AGGCCGGCTT CGTCAACGGC TCGACCCTCA CCATCAACGG CGGTCAGCAC
TTCGTCTGA
 
Protein sequence
MAQERVALVT GGTRGIGAAI SKRLKDKGYK VAANYGGNDE AANAFKAETG IPVFKFDVGD 
LASCEAGIKA IEAEVGPIDI LVNNAGITRD GAFHKMTFEK WQAVIRTNLD SMFTCTRPLI
EGMRSRNFGR IIIISSINGQ KGQAGQTNYS AAKAGVIGFA KALAQESASK GVTVNVVAPG
YIATEMVMAV PEDIRNKIIS TIPTGRLGEA DEIAHAVEYL ASDEAGFVNG STLTINGGQH
FV