| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3679 |
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| Symbol | |
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| ID | 7115668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 3874580 |
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| End bp | 3876583 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643526414 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002422426 |
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| Protein GI | 218531610 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCG ATACGCTCGA TTTACTCGAT CAGGAGCTCG GCAAGCGTTG GTTTCAACGC
CGTTCGCCGA TTCTGAATGC CGCTTTCAGG GCGCAATACG CACAGGCGAT GCGCGAAGAG
ATGGGTCGCG CGTGTCAGTT GGTGGGCCTG CTCTACGTCG CGTTCGGCGT GATGGATGCG
CTCCTCATCC GCGACATGCT CCCCTACCTC ATCGCGCTGC GTCTCGTGCT CGGCGTGGGC
TACGTCACTT CGATCATGCT GCAGGTCCGT CGCGGCGCCG ATACGCAGAC CCTCGAACTT
CAGTGCTCAC TCGGCATCTA TGTCGGCTTC GCAGCCTGGC TCTATCTTGC GACCCAGAGC
TCCGATGAAA CAGCGATCCT CTACTATGCC GGATACGGCT TGATCTTCAT GCTGGTCGCA
AATCTGTTCT TCAACCTCAG TTTCAGGTTC GCTCTGCTCT CGTCAGGCCT GATCACCGCG
ACATTCCTGT TCTGGGCCCT CCGTTCGAAC GGGAATTTAT CCTACATCAT CTGCTTTAGT
TCCTTATATA TACTGAGCTT TCTGCTCACG GCGTTCCTCA ATCTCAAGTA CAATCGAGAG
CGGTACCGCG TGCATTTGAA CGCGTGCCGG GCCGAGTTGC AGCAGCGCGA GGTCGTTCAA
CGCGGCGAGG AGCTGTTCCG GCTGTCCACG ACCGACGTCC TGACGGGCTT GGCCAACCGC
CGTGCGATCG ACAGCGTCCT GCAGGAACTC TGGCTCGCCA ATGTCAACTC GGGGCAGGCG
TTCGGCGTGA TCCTGATCGA TGTCGATTTC TTCAAGCTCT ACAACGATCG CTACGGGCAT
CAACGGGGCG ATAGCTGCCT CGCCGCTTTG GGTGAGGCGA TGCGCGGCGC TGCCGATAAG
AGGCGGTATG CGATCGGGCG CTTCGGAGGC GAGGAGTTCG CGGCTCTCTT CCAGGCCGAT
TCAGCCGAAC AGGTTCTCGA ATTCGCTGAG GAGGTTCGTC AAGCCGTCGA GGCGCTGCAG
ATCCCCCATG CAGCACGGCG TGATCCGCTC TCCCATGTCA CGGTGAGCAT CGGAGCGGCG
TTCTCCGCGG ATGTCGCGGA CGATAAGCCG GAGCGTGCGA TTTCCGCAGC TGACGACGCT
CTCTATGTCG CGAAGGAAGA AGGCCGCAAT CGCGCGCGAA TCTTCAATGC GAGGATGCGC
CATAGCACGG AGAGCGATGA TCTGAATGCG GAGATGCTCC GAGCGGCTGT CACGGACGGG
CGCATATCCG CGGTCTTTCA GCCCATCGTC GATGTCTCAA GCGGACGCAT CTGGGCCGCG
GAGACGCTGA TGCGGCTCAA GGACACGCAA GGCCGCGCGA TCTCCCCGGA AACGTTCATC
CCTGTCGCCG AGCGCACGGG TGCTATTCTT GAGATGGGCG CATGGATCCT GCGTCAGGCT
TGCGACCTTC TCGCGAGCGA GCCCGAACTA CCCATCGTCA GCGTGAACAT CTCCGCACGA
CAGATTTCCG AACCGAACTT CATCAGTTCC GTCGAAGCCA TCGTCCGAGC CGCCGGCATC
GCTCCGTCAC GCCTTGCTCT GGAGATCACC GAGAGCGGGG AGATCAGTGG CAACCCAGAA
GTCGCTCAGT TGATGGACCG GCTCAACACG ATCGGGATCC GCGTTTGGCT GGATGATTTC
GGGACGGGTT TTGCGGGCCT TACCTGCCTG AGTGAACTGC GGTTTGATAT GGTGAAGATC
GACCGTTTCT TTGTGCAGAG CTGTGATACC CCGCGGGGGG CAAAGCTGCT TAAAAACATC
ATCGACTTGG TCAACAATTG CGCTCAGAGG CCGATCGTCG AAGGCGTTGA AGAGGCGTGG
CAGATCGACC TTGTGTCGTC TTTCGGCGCG GATCTCTTTC AAGGCTATCA CCTCGGAAGG
CCAATGCCCC GAAGCGAACT TAAGCTGATG CTTTCTGAGT ATTTGCCTTC AAATGAGAAT
TTAGAAATGC TGCACAGTAG TTGA
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| Protein sequence | MNSDTLDLLD QELGKRWFQR RSPILNAAFR AQYAQAMREE MGRACQLVGL LYVAFGVMDA
LLIRDMLPYL IALRLVLGVG YVTSIMLQVR RGADTQTLEL QCSLGIYVGF AAWLYLATQS
SDETAILYYA GYGLIFMLVA NLFFNLSFRF ALLSSGLITA TFLFWALRSN GNLSYIICFS
SLYILSFLLT AFLNLKYNRE RYRVHLNACR AELQQREVVQ RGEELFRLST TDVLTGLANR
RAIDSVLQEL WLANVNSGQA FGVILIDVDF FKLYNDRYGH QRGDSCLAAL GEAMRGAADK
RRYAIGRFGG EEFAALFQAD SAEQVLEFAE EVRQAVEALQ IPHAARRDPL SHVTVSIGAA
FSADVADDKP ERAISAADDA LYVAKEEGRN RARIFNARMR HSTESDDLNA EMLRAAVTDG
RISAVFQPIV DVSSGRIWAA ETLMRLKDTQ GRAISPETFI PVAERTGAIL EMGAWILRQA
CDLLASEPEL PIVSVNISAR QISEPNFISS VEAIVRAAGI APSRLALEIT ESGEISGNPE
VAQLMDRLNT IGIRVWLDDF GTGFAGLTCL SELRFDMVKI DRFFVQSCDT PRGAKLLKNI
IDLVNNCAQR PIVEGVEEAW QIDLVSSFGA DLFQGYHLGR PMPRSELKLM LSEYLPSNEN
LEMLHSS
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