| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3547 |
|---|
| Symbol | |
|---|
| ID | 7113680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 3733917 |
|---|
| End bp | 3735374 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643526283 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_002422295 |
|---|
| Protein GI | 218531479 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00205228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.594146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CCCGCCAACC CCGCGAAACC CGCGCCGGCC TCGAGCCGCT GGCGGTGCTG
CCCGTGTTCG TGCCGCTCCA GGACAAGCGG GCGGTGCTCG CCGGTTCCAA CGGTGGCGCC
CCCTGGAAGG TGAAGCTGCT CGCCGCCGCC GGCGCCCAGG TCGATGTCTA TGCCGAGGAG
CCGAGCGAGG AGCTGCGCGG CGTGCCGGCC GAGATCGCCG CCGGCTCGGT GACGCTGCAC
GAGCGCGGCT GGACCCCGGA AGACCTGCAG GGCGCGGCCT TCGCCATCGG TGCCATGGAG
GACGAGGACG ATTGCATTGC CTTCGTCGCG GCGGCGCGCG CAGCCGGGGC CATCGTCAAC
GCGGTCGACC GGCCGCATCT CTGCGACGTG AAGTTCGGCG CCATCGTCAA CCGCTCGCCG
CTCGTCGTCG GCATCTCGAC CGAGGGCGCC GCCCCGGTCT TCGGGCAGAC GGTGCGGGCG
CGCATCGAGG CGATGCTGCC GCGCGGCTTC AAGCACTGGG TCGCGGCCGC CCGCGACTGG
CGCGAGGTGG TCTCGGCCCG CTTCCACGGC TTCTCCGAGC GGCGCGGCTT CTGGGAGCGC
TTCACCGACC GCGCCTTCGC CGAACCGGAC CGCACCCCGA CGGAAGCCGA CCTCGCCGAC
CTGATGGGTC AGGCCGAAGC GCTGCCCCTC GGCGGCGCCG TGACCCTGGT CGGGGCCGGG
CCGGGCGATG CCGAACTGCT CACCCTCAAG GCGCTGCGGG CCCTGCGCAA CGCCGACGTG
ATCCTCTACG ACGACCTCGT CGCCCCCGAA ATCCTCGACT ATGCCCGCCG CGAGGCCCGG
ACCATGCTGG TCGGCAAGAC TGGCCACGGC CCATCCTGCC GCCAGGACGA CATCAACGCG
CTGATGGTCT CGCTGGCGAA GTCCGGCAAG CAGGTGGTGC GCCTGAAATC CGGCGATCCG
CTCGTCTTCG GCCGGGCCGG CGAAGAGATC GAGGCGTGCG AGGCCGCGGG CATTCCCTGC
ACCATCGTCC CCGGCGTCAG CGCGGCGCAG GGCGCGGCGG CCGCGCTCGG CGTCTCGCTG
ACCCATCGCG ACGCGGCCCG GCGCTTGCAA TTCGTCACCG GCCACGACCG CCGCGGCGCG
CTGCCGGAGG ATCTGAACTG GAGCGCGCTC GCCGACCGCA GCGTCACCAC CGTGGTCTAC
ATGCCCAAGC GCACGCTGCG CGTCCTGCTG GAGCGGGCGG TCGCCGAGGG GCTGGCGCCT
GAGACGCCGG CCCTCGTCGT GTTCAACGCG ACCCGGGCCA AGCAGGCGAC GGTGGCCGGC
ACCGCCGCCG ACCTTGCGGA GCGGGTCGAG GCCTCGGGGC TCGAAGGCCC GGCGCTGCTG
ATGGTCGGCG AGGCCCTGCG CCGGCACAAC GCCCGCAGCG CGGACCGGGA TGTCGAGATC
CGCGCGGAAG CCTCCTGA
|
|---|
| Protein sequence | MSTPRQPRET RAGLEPLAVL PVFVPLQDKR AVLAGSNGGA PWKVKLLAAA GAQVDVYAEE
PSEELRGVPA EIAAGSVTLH ERGWTPEDLQ GAAFAIGAME DEDDCIAFVA AARAAGAIVN
AVDRPHLCDV KFGAIVNRSP LVVGISTEGA APVFGQTVRA RIEAMLPRGF KHWVAAARDW
REVVSARFHG FSERRGFWER FTDRAFAEPD RTPTEADLAD LMGQAEALPL GGAVTLVGAG
PGDAELLTLK ALRALRNADV ILYDDLVAPE ILDYARREAR TMLVGKTGHG PSCRQDDINA
LMVSLAKSGK QVVRLKSGDP LVFGRAGEEI EACEAAGIPC TIVPGVSAAQ GAAAALGVSL
THRDAARRLQ FVTGHDRRGA LPEDLNWSAL ADRSVTTVVY MPKRTLRVLL ERAVAEGLAP
ETPALVVFNA TRAKQATVAG TAADLAERVE ASGLEGPALL MVGEALRRHN ARSADRDVEI
RAEAS
|
|---|
| |