| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3517 |
|---|
| Symbol | |
|---|
| ID | 7114275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 3702381 |
|---|
| End bp | 3703037 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643526253 |
|---|
| Product | protein of unknown function DUF88 |
|---|
| Protein accession | YP_002422265 |
|---|
| Protein GI | 218531449 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0650346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA AGCAACGTAC CGCAGTTTTT ATCGACGGCG CAAATCTGTA TGCGACCACG
AAGGCGCTCG GTTTCGACAT CGACTACAAG CGACTGCTCA AGGATTTTCA GAGCCGCGAT
AATCTCATTC GCGCTTTCTA TTACACAGCA ATGATTGAGG ATCAGGAGTA TTCCTCGATT
CGCCCGCTGA TCGATTGGCT CGACTATAAT GGCTACCGGG TCGTCACCAA GCCGGTGAAA
GAATTCACCG ACTCCGCCGG GCGCCGCAAG ATCAAGGGCA ACATGGATAT CGAGCTCGCC
ATCGACGCGC TCGAACTGGC CCCGCACATC GACCACATGG TGCTGTTCTC CGGCGACGGC
GATTTCCGTT CGCTCGTGGA GGCGATCCAG CGCCGCGGCG TTCGCGTCTC GGTCGTCTCC
ACCATTCAGA CCCAGCCGGC GATGATCGCC GACGACCTGC GGCGTCAGGC GGACGAGTTC
ATCGATCTCG CCCATCTCGC GAGCCGGATC GGCCGTGACC CGAGCGAGCG CACCACCCGC
GCGCCCGGCG ATGGCCCCCG CCGCGACTTC GCCGAGCGTG CGCCCCGCCC CAATCCCGGT
CTCGAGAGCC GTTATGGCAT CCGCCCCGGC GCGACCGACG AGGAAGCGGA AGGCTGA
|
|---|
| Protein sequence | MSDKQRTAVF IDGANLYATT KALGFDIDYK RLLKDFQSRD NLIRAFYYTA MIEDQEYSSI
RPLIDWLDYN GYRVVTKPVK EFTDSAGRRK IKGNMDIELA IDALELAPHI DHMVLFSGDG
DFRSLVEAIQ RRGVRVSVVS TIQTQPAMIA DDLRRQADEF IDLAHLASRI GRDPSERTTR
APGDGPRRDF AERAPRPNPG LESRYGIRPG ATDEEAEG
|
|---|
| |