Gene Mchl_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3336 
Symbol 
ID7117104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3524427 
End bp3527624 
Gene Length3198 bp 
Protein Length1065 aa 
Translation table11 
GC content67% 
IMG OID643526084 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002422098 
Protein GI218531282 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.115718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA GTGCCCGCTC CCCGAACCTT AACTTCCTCT CGGGCGGGGG ACGGATGGGC 
GAACGTATGC GCGCCCATGA CTGGTCGAAT TCCGCACTAG GACGGCCGGA GACCTGGCCG
CAGTGCCTTC GCTCGGCCGT GAGCCTGATG CTCGGCTCCA AGTTCCCGAT GTTCGTGGCT
TGGGGACCGG AGCTCGGATT CCTCTACAAC GAGCCTTACG CGGAAATCCT CGGCGACAAG
CATCCGGCCG CCCTGGGGAG CCGCTTCCAC GACATCTGGG CCGAGATCTG GGACGACATC
GCGCCGCTGA TCGACCGCGC CATGGCGGGC GAGGCGACAT GGGCCGAGAA CCTGCCGCTC
GTCATGAACC GACACGGCTA TGACGAGCGG ACTTGGTTCA CCTTCTCTTA CTCGCCCGTG
CGGGACGATG AAGGCGAGGT CGGCGGCATG TTCTGCGCCT GCACGGAAAC GACCGCCAAG
GTGAAAGCTG AGGAGGCCCT GCGCGCGAGC GAGGCTCGGG CCTCCGGCGT GCTGGAGGGC
ATGGGCGAGG GCTTCATGCT GCTCGACCGT GATTTCCGCA TCCTACAGAT GAACGCGGAA
GGCTTCCGGT TGGAGGAGCG GCCGCCCGGC GAGGTGCTCG GGCGCTCACA TTGGGAGGTC
TATCCGGGCT CGGAGCGGAT GCCCATCGGA CAAATGTATC TGCGGGCCAT GCGCGGGCGG
ATGCCCTTGA CGCTGGAACA CCTTTACGTC TGGCCCGACG GGCACGCGGC TTGGCTGGAG
GTGCGAGCCT ACCCGCATCC GGAAGGGCTG GCGCTGTTCT ACCGCAATGT GACCGAACGC
CGGGAGCGCG AGGAGGCGCT GCGCGAGGCC GAGGCGCGAC TGCGCGCTCT GGCGGACAAC
CTGCCTGGCG GCATGGTCTA CCAGATCGCG ATGGACAGGG ACGGTTCGAA CCGGCGCTTC
CTCTACGTGT CGCGGGGCTT CGAGCGCATG ACCGGCCTGT CGGCCGAGGC CGCGCTGCTC
GACCCGGCCG CGGCCTACAA CCTAATCCTG CCCGAGTACC GCGAGAGCTT GGCCGCAGCC
GAGCACGTCG CGATCCGGGA CCTCGCGCCG TTCGACTTCG AGACGCCCTT CCGCCGTAGC
GACGGGGAGG TGCGCTGGAG TCGCATCATC TCGGCGCCTC GGCGGCAGCC CGACGGTTCG
CTCGTCTGGG ACGGCATCCA GTTCGACGAT ACCGACCGCA AGCAGGTCGA GGAGCGCCTG
CGCGAGAGCG AGGCCAAGTT CCAGGCAATC GCCAACTCCA TCGACCAGAT GGTGTGGTCG
ACGCGTCCCG ACGGCCACCA CGATTACTTC AACCAACGCT GGTACGACTT CACCGGCGTG
CCGGCAGGCT CGACGGACGG CAAGGACTGG GAGGACATCG TCCACTCGGA CGACCGGGCG
CGCACGTGGA CGTCCTGGAG GGAGTGTCTC GCAACGGGCG AACCCTACCG GATCGAGTAC
CGGCTGCGCC ACCGCACAGG GCAGTACCGC TGGACGCTCG GACGAGCACT GCCGATGCGC
GACGAGGCGG GCCGGATCAC GCGCTGGTTC GGCACCTGCA CCGACATCCA GGACCTCGTC
GAGGCGCGCG AGGTACTGGC GCGCTCGCGC GAGGACCTCG AACGGTTGGT GGCGGAACGT
ACGGCCGACC GTGACCGCAT GTGGCGGCTC TCGACGGACG TCATGCTGGT CGCGCGCTAC
GACGCCGCCA TCGAGGCGGT GAACCCGGCC TGGACCACGC TGCTCGGGTG GGATGAGCGC
GAGCTCATCG GTAGCGCCTT CATGGACCTC GTCCATCCGG ACGACGTCGC CGCCACGCTT
GCGGAGGTCG GGAAGCTGTC GGAGGGTTTG ACCACCCTAC GGTTCGAGAA CCGCTATCGC
CAGAAGGACG GCAGCTACCG CTGGCTCTCG TGGACAGCCG TCCCCGCCGA GGATCTCATC
CACGCGGTCG GGCGTGACAT CACTGCTGAA AAGGAAGCCG CACAAGCCCT CGCGGAAACC
GAGGAGGCGC TGCGCCAAGC CCAGAAGATG GAAGCCGTGG GTCAACTGAC GGGCGGCATC
GCGCACGATT TCAACAACCT CCTGACCGGC ATCGTCGGCT CCCTCGACAT GATGCAGACC
CGCATCGCCC AGGGTCGAAC CGACACCATC GAGAGGTACG CCAAGGCGGC GATGTCCTCG
GCCAATCGCG CGGCCGCCCT GACGCACCGC CTGCTAGCCT TCGCTCGCCG GCAGCCCCTC
GACCCGAAGC CGGTCAACGC CAACACGCTC GTGACCTCGC TGGAGGATCT GCTGCGCCGG
ACCATCGGCG AGGCCATCAG CTTGGAGATC GTCACGGCAG GCGGCCTTTG GCCGACGCTT
TGCGACCCGC ACCAGCTCGA AAGCGCTGTC CTGAACCTGG CCATCAACGC GCGCGACGCC
ATGCCGGACG GCGGCAAGCT CACCATCGAG ACCTGCAACA CACACCTCGA CCGCGCCTAT
GCCAAGCTGC ACCCAGGGGT GGAGCCCGGC CAGTACATCT GCATCTGCGT GACCGATACC
GGCACCGGCA TGCCACCGGA CGTCGTCGCG CGGGCCTTCG ACCCGTTCTT CACGACGAAA
CCCATCGGCC AGGGAACGGG GCTCGGCCTG TCGATGATCT ACGGCTTCGC GCGCCAGTCG
GAGGGTCACG CCAAGATCTA CTCGGAGGTC GGGCAGGGCA CGTCAGTGAA GATTTACCTG
CCGCGCCATC GCGGAGCTTT GGCCGGGGAG GACACGCAGG CATCGGGCCT GACGGAAGCG
CACCGGGCCG AGACCGGCGA GACGGTGCTG GTCGTGGAGG ACGAGCCGGT GGTGCGCGAC
CTCATCGTCG AGGTGCTGCA CGATCTCGGC TACCGGGCCT TGGAGGCGCA GGACGGACCC
TCCGGCCTCG CCGTTCTGCG GTCGCGCGAG CGCATCGACC TCTTGGTCAC CGACGTCGGC
CTACCGGGCT TGAACGGGCG CCAGCTCGCC GACCAGGCCC GCGAGGGGCG GCGCGAGCTC
AAGGTGCTGT TCATCACCGG CTATGCCGAG AACGCGATGT TCGGGAACGG CCACCTCGAA
CCAGGCATGC AGATGATGAC CAAGCCCTTT CCGGTTGAAG CCTTGGCGAC GCGCATCCGC
GAGATGATCC AGAGTTGA
 
Protein sequence
MTESARSPNL NFLSGGGRMG ERMRAHDWSN SALGRPETWP QCLRSAVSLM LGSKFPMFVA 
WGPELGFLYN EPYAEILGDK HPAALGSRFH DIWAEIWDDI APLIDRAMAG EATWAENLPL
VMNRHGYDER TWFTFSYSPV RDDEGEVGGM FCACTETTAK VKAEEALRAS EARASGVLEG
MGEGFMLLDR DFRILQMNAE GFRLEERPPG EVLGRSHWEV YPGSERMPIG QMYLRAMRGR
MPLTLEHLYV WPDGHAAWLE VRAYPHPEGL ALFYRNVTER REREEALREA EARLRALADN
LPGGMVYQIA MDRDGSNRRF LYVSRGFERM TGLSAEAALL DPAAAYNLIL PEYRESLAAA
EHVAIRDLAP FDFETPFRRS DGEVRWSRII SAPRRQPDGS LVWDGIQFDD TDRKQVEERL
RESEAKFQAI ANSIDQMVWS TRPDGHHDYF NQRWYDFTGV PAGSTDGKDW EDIVHSDDRA
RTWTSWRECL ATGEPYRIEY RLRHRTGQYR WTLGRALPMR DEAGRITRWF GTCTDIQDLV
EAREVLARSR EDLERLVAER TADRDRMWRL STDVMLVARY DAAIEAVNPA WTTLLGWDER
ELIGSAFMDL VHPDDVAATL AEVGKLSEGL TTLRFENRYR QKDGSYRWLS WTAVPAEDLI
HAVGRDITAE KEAAQALAET EEALRQAQKM EAVGQLTGGI AHDFNNLLTG IVGSLDMMQT
RIAQGRTDTI ERYAKAAMSS ANRAAALTHR LLAFARRQPL DPKPVNANTL VTSLEDLLRR
TIGEAISLEI VTAGGLWPTL CDPHQLESAV LNLAINARDA MPDGGKLTIE TCNTHLDRAY
AKLHPGVEPG QYICICVTDT GTGMPPDVVA RAFDPFFTTK PIGQGTGLGL SMIYGFARQS
EGHAKIYSEV GQGTSVKIYL PRHRGALAGE DTQASGLTEA HRAETGETVL VVEDEPVVRD
LIVEVLHDLG YRALEAQDGP SGLAVLRSRE RIDLLVTDVG LPGLNGRQLA DQAREGRREL
KVLFITGYAE NAMFGNGHLE PGMQMMTKPF PVEALATRIR EMIQS