Gene Mchl_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3323 
Symbol 
ID7117091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3510069 
End bp3511190 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content65% 
IMG OID643526072 
Productintegrase family protein 
Protein accessionYP_002422086 
Protein GI218531270 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAA TCAGGAAGCG GACGCTTCCA TCAGGCAGGA CGTGCTGGCT AGCGGCCTAC 
GTGGACAGCG GGGGGAAGCG GCGCTTTCGA CAGTTCTCCA CGAAGAGGGA GGCCGACGCC
TTTCTTGTCC AGGCGCGGAG TCAGGTTGGG CAAGGCGTCC ACACGCCGGA CAGCCTTTCG
CCGACAGTCG CGGAGGCGGC GGAGATTTGG CTAAAGCGAT GCGAGCGCGA CCGGCTTGAG
CCAACAACGA TTGAGCAATA CCGCGGGCAC GTGACCCTGC ACATCGCGCC CCATATCGGA
GCCGTGAAGC TGTCCCGGCT GACGGCGCCC CTGGTGAACG AGTTCGCCGA GAAGCTTCTC
ACCGGCGGCC GGTCGCGCGA GCTATGTCGG CGCGTGCTGA TCAGCCTCTC GTCTATCGTA
ACCGAGGCAC AGCGGCGCGG CCTCGTGACC GTCAACAACG TACGCAGCGC CAAGCCGGTG
AAGCGCTCTG GCCGGGAGGA CACGCGGCCG GTCATGCCAA CAAAGGCCGA ACTCAGGGCG
ATCATCAGGG CAACGCCCGA TCGGTCGCGA CCGATGATTC TTACACTCCT GTTCGCCGGC
CTGCGGGGTT CAGAAATGCG GGGGCTGCTT TGGGAGGACG TGGACCTGAA GTGCGGTGTG
CTGCACGTCC GGCGGCGGGC TGATCGGTTC AACAGCTTCG GGCCGCCGAA GTCGAAGGCT
GGTATCCGGG ATATCCCTCT CCCACCCACC TTGCTTCAAG ATCTCAAGGC ATGGCGGTTG
GCCTGCCCAA ATGGGCCGCT GGGGCTGGTC TTTCCGACCA CGGCTGGCAC CGTCCAGGGG
CACGCCAACA TCCTGCATCG GGTGTTCTGG CCCCTTCAGA TCGCGGCCGG CGTCACGGTG
CCGGGACCCG ATGGCAGGCT CAAGGCAAAG TATGGCCTCC ATGCCCTACG TCACGCCGCG
GCCGCCCTTT GGATCGAACA GGGCCTCAAT TCCAAGCGGA TCCAAACCCT GATGGGGCAC
GCCTCCATCC AGCAGACGAT GGACCGATAT GGCTACTTGT TCGAAGCGCG CGAGGATGAG
ACGGCCATGC TGGCGGGGCT CGAGTCTGGG CTCTTGAACT GA
 
Protein sequence
MATIRKRTLP SGRTCWLAAY VDSGGKRRFR QFSTKREADA FLVQARSQVG QGVHTPDSLS 
PTVAEAAEIW LKRCERDRLE PTTIEQYRGH VTLHIAPHIG AVKLSRLTAP LVNEFAEKLL
TGGRSRELCR RVLISLSSIV TEAQRRGLVT VNNVRSAKPV KRSGREDTRP VMPTKAELRA
IIRATPDRSR PMILTLLFAG LRGSEMRGLL WEDVDLKCGV LHVRRRADRF NSFGPPKSKA
GIRDIPLPPT LLQDLKAWRL ACPNGPLGLV FPTTAGTVQG HANILHRVFW PLQIAAGVTV
PGPDGRLKAK YGLHALRHAA AALWIEQGLN SKRIQTLMGH ASIQQTMDRY GYLFEAREDE
TAMLAGLESG LLN