Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3100 |
Symbol | |
ID | 7118378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 3279740 |
End bp | 3281533 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643525851 |
Product | ABC transporter related |
Protein accession | YP_002421866 |
Protein GI | 218531050 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.87066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.023746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGCGC GCCGGCCGCT CCTGAGAGGC GACACCCTTC CCCTGCTCGG GCGGCTCTGG CGGGAGTGGC TCGCCCCGCA CCGCGCCACG CTCGCGGTGG TGCTCGTGCT CATCACCGTC GTCGGCGTGG CGACGGGGCT CTACCCCGCC CTCATCAAGG CTGCGTTCGA CGCGTTCGAC CGCAAGGACG TGAGCGCCCT CGCCTACGGC CCGCTCATCG TCATCGCGGT TACCTCCGCG CGCGGCTTCG CCCTGTTCGG CCAGACGGTG CTCACCAACC GGGTCGTCAC CCGCGTCGAG GCCGACATGC AGGCCGCGCT CTATGCCCAC CTGATCGATG CCGACCTCGC CCAGCTCGGC CGCGAAAGCC CGGCGGCCTT CACCCAGCGC TTCACCACCG ACTTCGCCTT CATCAAGGAG GCGCTGACCC GCATCTCGAC GGTGCTGCTG CGCGATGTGG CGATGCTGGC CGCCCTGGTG ATCGCGCTGG TCTGGATGGA CCCGCTGCTG ACGCTCGCCG CCGCGGTGAC GGCGCCTCTT GTCGCCGGCC CGGTCAACCG GATCGGCAAG CGGTTGCGCC AGGTCTCGAC CACGACCCAG GAGCAGATGG GCGCCACCGC GAGCCTCATC ACCGAGAGCC TCCAGGGCGC CCGCGTCGCC AAGACCTACG CCCTCGAAGG CTATCTCAAG GACCGCGCGG CGCAGGCGTT GGACGAGGTG CGCCGCCTCA AGATGAAGGC GGCCAACGCG CGCGGACGGC TCGACCCGCT GATGGAGATC GGCGGCGGTC TCGCGGTGGC CGGCGTGCTG GTGCTGGTGG GCCAGCGGGT GATGTCGGGC GACCGCACCG TCGGCGACTT CACCGGCTAC GTCGCCGCGC TCCTGCTCGC CGCGCAGCCG GCCCGGGCGC TCGGCACCCT CAACGCCATC CTGCAGGAGG CGGCGGCGGC CCTGACGCGC TACTTCGCCC TGATGGACGA GCAGCCGACG ATCCGCGAAT CCGCGTCGGC CCGTCCGCTC ACGGTGTCGC GGGGCGAGAT CCGCTTCGAG AACGTGCATT TCCGCTACCG GGCCGACGCG CCCGCCCTCG AAGGCATCGA CCTCGTGGTG CCCGCGGGCT CGACCACGGC GCTCGTCGGG CGCTCCGGCT CCGGCAAATC CTCGCTGCTC AACCTCGTCC CTCGGCTTCA GGACGTGACG GCGGGCCGGG TCCTCATCGA CGGCACCGAT GTGCGCGACG TGACCATTGC CTCCCTGCGC GCGGCGATCG CGGTGGTGTC GCAGGAAGTG GTGCTGTTCG ACGACACCGT CGCCGCTAAT ATCGGCTTCG GCCGGCCCGG CGCGACGCAG GACGAGATCG AGGCGGCCGC AAGGGCCGCA GCGGCCCACG GGTTCATTAG CCGTCTGGGC GAGGGCTACG CGTTCCGGGT CGGGCCGGGC GGCGGCCGGC TCTCGGGCGG TGAGCGCCAG CGCATCTCGC TGGCTCGCGC CTTCCTCAAG AATGCGCCGA TCCTGCTCCT CGACGAGGCG ACCTCCGCCC TCGATTCCGA ATCCGAGCAC CTCGTGCAGG AGGCGCTGGA GCGGCTGATG CGTGGGCGCA CGACGCTGGT GATCGCCCAC CGCCTCTCGA CCGTGCGCGA GGCGAACCGC ATCGCGGTGC TGGAGGCCGG CCGAGTGATC GAACTGGGCC GCCACGACGA ACTGGTGGCC GCGAGCGGCA CCTATGCTCG TCTGCACCGG CTGCAATTGT CGGACGATTC CGGCGTATCG AAAGCGCAGG CGGCCCCGGT CTGA
|
Protein sequence | MMARRPLLRG DTLPLLGRLW REWLAPHRAT LAVVLVLITV VGVATGLYPA LIKAAFDAFD RKDVSALAYG PLIVIAVTSA RGFALFGQTV LTNRVVTRVE ADMQAALYAH LIDADLAQLG RESPAAFTQR FTTDFAFIKE ALTRISTVLL RDVAMLAALV IALVWMDPLL TLAAAVTAPL VAGPVNRIGK RLRQVSTTTQ EQMGATASLI TESLQGARVA KTYALEGYLK DRAAQALDEV RRLKMKAANA RGRLDPLMEI GGGLAVAGVL VLVGQRVMSG DRTVGDFTGY VAALLLAAQP ARALGTLNAI LQEAAAALTR YFALMDEQPT IRESASARPL TVSRGEIRFE NVHFRYRADA PALEGIDLVV PAGSTTALVG RSGSGKSSLL NLVPRLQDVT AGRVLIDGTD VRDVTIASLR AAIAVVSQEV VLFDDTVAAN IGFGRPGATQ DEIEAAARAA AAHGFISRLG EGYAFRVGPG GGRLSGGERQ RISLARAFLK NAPILLLDEA TSALDSESEH LVQEALERLM RGRTTLVIAH RLSTVREANR IAVLEAGRVI ELGRHDELVA ASGTYARLHR LQLSDDSGVS KAQAAPV
|
| |