Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3045 |
Symbol | |
ID | 7118323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 3216026 |
End bp | 3217054 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643525796 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_002421811 |
Protein GI | 218530995 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTG ACCATTATTT GAGCGCGCTA CGCGGGGCGG ACGATCGGGG GGCGGATAGC CCGCCGGTCC TGCTGGCACC GCTATCGGGC GTCACCGATC TCCATATGCG GCGCCTCGCC CAGCGGCTTG GTGCCAGTGC CGTGGTCTCC GAGATGGTCG CGGCGGCCGA GCTGGCGAAG GGTGACGCCG AATCGCAGGT TCGGGCCGAG GGTGCGGGGG TGGACCCGCA TGTGGTGCAG CTCGCCGGCT GCGCGCCCGA ACCGATGGCC GAGGGGGCCC GTATCGCCGT GGCGAACGGC GCCGATGCCA TCGACATCAA CATGGGCTGC CCGGCCAAGA CCGTGACCGG CGGCGAATCG GGCTCGGCGC TGATGCGCGA CCTCGATCAC GCCGCGCGGC TCCTCGCGGC GGTGCGCGGC GCGGTCGATG TGCCCGTCAC CGTGAAGATG CGGCTCGGCT GGGATCACGC CAGCCTCAAC GCCGCCGAAC TGGCGCGGCG CGCCGAAGCC CTCGGGCTCG ACGGCGTGAC GGTCCACGGC CGCACCCGGC AGCAATTCTA CAAGGGTCAG GCCGATTGGT CGGCGATCCG TCCCGTGGTC GAAGCGGTGC GCATCCCCGT CATCGCCAAC GGCGACATCA CCGGCCTGGA GGAGGCCCGC GCCTGCCTCA GCCAATCCGG TGCGGCGGGC GTGATGGTCG GGCGCGCGGC GGTCGGGCGT CCCTGGCTCG TCGGCGAGAT CGCCGCCGGG CTCGCCGGTC GTGTGGCTTC GCCGCTCTCG GCCGAGCAGC GGGCGGCAGT CGCGGCCGAG CATTACCAGG GGCTGATCGC GCTCTTCGGC GCGGCGATGG GCGTGCGCCA CGCCCGCAAG CATCTCGCGG CCTATGCCGA CGCGGCCGGC GGACTGACCC CGGACGACCG GCGCCGCCTC GTCACCACAC ATGATCCGGC GGAGGCGCTC CGCCTCCTGC AACGCGCGTT CCTCGAACCG GCCGGGACGG CGACCACGCC CCTCGGCGAG GCAGCCTGA
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Protein sequence | MTRDHYLSAL RGADDRGADS PPVLLAPLSG VTDLHMRRLA QRLGASAVVS EMVAAAELAK GDAESQVRAE GAGVDPHVVQ LAGCAPEPMA EGARIAVANG ADAIDINMGC PAKTVTGGES GSALMRDLDH AARLLAAVRG AVDVPVTVKM RLGWDHASLN AAELARRAEA LGLDGVTVHG RTRQQFYKGQ ADWSAIRPVV EAVRIPVIAN GDITGLEEAR ACLSQSGAAG VMVGRAAVGR PWLVGEIAAG LAGRVASPLS AEQRAAVAAE HYQGLIALFG AAMGVRHARK HLAAYADAAG GLTPDDRRRL VTTHDPAEAL RLLQRAFLEP AGTATTPLGE AA
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