| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2735 |
|---|
| Symbol | |
|---|
| ID | 7113925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 2872339 |
|---|
| End bp | 2873325 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643525483 |
|---|
| Product | tyrosine recombinase XerD |
|---|
| Protein accession | YP_002421502 |
|---|
| Protein GI | 218530686 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.206607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG ACGGTTCCGC GCTCCCAGGC GGAGCGGAGG ATCCGGGTCA GCTCTTTCTC
GACATGCTCG CCGCCGAACG CGGTGCGGCG GCCAACACCT TGGCCGCCTA TCGGCGCGAC
CTCGACGACT ACCTCGGCTA CCTCGCGCAA GGCGGGATCG ACCCGGAGGA GGCGCAGGCC
GAGCAAGTCC GCGCCTACAT CGCCTCCCTG GAGCCGCGCG GATTGAAGGC GTCGTCGGCC
GCCCGGCGCC TCTCCTGCAT CCGCGGCTTC CACCGCTTCC TCTACGCGGA GGGCTATTCC
GAAACCGATC CGACCGCGCC GGTCGCAGCC CCCCGGCGCG CCAAGGGCCT GCCGAAGGTC
CTGTCGGTGG CGGAGGTCGA TCGCCTGCTC GCGACGGCGC GCGAGCGGGT CGAGGCGGCG
GGCGACGACC GTGCGGAGGC CCGCGCGGCC GCGCGGATGC TCTGCCTGCT CGAACTCCTC
TACGCCACGG GCTTGCGCGT TTCGGAACTC GTCGCCCTGC CGCGCTCGGC CGCGGCCACC
CGCGAGCGCT ACCTCGTAGT CAAGGGCAAG GGCGGGCGCG AGCGCCTCGT GCCGCTCACC
GACCTCGCGC GCGAAGCGAT GCGCACCCAC GTCGCGCACC TGACCGCCGA GGGGGCCTGG
CTGTTTCCCG CGGAGAGCGA GAGCGGTCAT CTCACCCGGC AAGCCTTCGC CCGCGACCTC
AAGACCGCCG CTGCCGCCGC CGGCCTGCGG ACCGACCGGG TGAGCCCGCA CGTTCTGCGC
CACGCCTTCG CCAGCCATCT GCTCCAGAAC GGCGCGGATC TGCGTATCGT CCAAGAATTG
CTGGGCCATG CCGATATCTC GACGACGCAG ATCTATACCC ACGTCCTGGA TGAACGTTTG
AAAGGCATGG TGCGCGATCT TCACCCACTC AACGATCGGG GCGATCAGAT CGAGGCGGGC
AGTGTTTCTT CTGACGAACC GTATTGA
|
|---|
| Protein sequence | MSADGSALPG GAEDPGQLFL DMLAAERGAA ANTLAAYRRD LDDYLGYLAQ GGIDPEEAQA
EQVRAYIASL EPRGLKASSA ARRLSCIRGF HRFLYAEGYS ETDPTAPVAA PRRAKGLPKV
LSVAEVDRLL ATARERVEAA GDDRAEARAA ARMLCLLELL YATGLRVSEL VALPRSAAAT
RERYLVVKGK GGRERLVPLT DLAREAMRTH VAHLTAEGAW LFPAESESGH LTRQAFARDL
KTAAAAAGLR TDRVSPHVLR HAFASHLLQN GADLRIVQEL LGHADISTTQ IYTHVLDERL
KGMVRDLHPL NDRGDQIEAG SVSSDEPY
|
|---|
| |