Gene Mchl_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2620 
Symbol 
ID7117367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2753059 
End bp2753805 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID643525366 
Productpyrimidine 5'-nucleotidase 
Protein accessionYP_002421388 
Protein GI218530572 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0626666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTCTTC CCGGCGAGAG TCACTTCACC ACCTCCGACG CCCGCGGGTT CTCCCACGTC 
GATACCTGGG TGTTCGATCT CGACAACACG CTCTACCCGA GCGACGCGCG GGTCTGGCCG
CAGGTGGACG AGCGGATCAC GCTCTACGTC ATGCGGCTCT ACGGGCTCGA CGCGATCTCG
GCGCGCGCCC TGCAGAAGCA TTTCTACCAC CGCTACGGCA CCACCCTGAA GGCGCTGATG
GTGGAGGAAG GGGTCGATCC GCACGACTTC CTCGACTTTG CCCACGACAT CGACCACTCG
ACGATCAAGC TCGACGAAGC GCTCGGGACC GCGATCGAGC ATCTGCCAGG CCGCAAGCTG
ATCCTGACCA ACGGATCGCG CCGCCACGCG GAATCGGTCG CGGGCAAGCT CGGCATCCTC
GACCATTTCG AGGACGTGTT CGACATCGCC GACGCCGACT TCATCCCCAA GCCCGACCGC
GGCACCTACG AGCGCTTCCT TCTGCGCCAC GGGGTCGATC CCCGGCGCTC GGCCCTGTTC
GAGGACATCG CCCGCAACCT CGTGGTGCCG CACGATCTCG GCATGGCGAC CGTGCTGGTG
GTGCCGCCGA CGCCCGATCC GTTCCGCGAA CTGTTCGAGC AGGAGGCGGT GCAGGAGCCG
CATATCGACC ACATCACCAG CGATCTGGCG GCCTTCCTCG TGCGCTGCGT GCTGCCGGTC
GTCCCACCCG GGCCCGCCGC ACCGTGA
 
Protein sequence
MLLPGESHFT TSDARGFSHV DTWVFDLDNT LYPSDARVWP QVDERITLYV MRLYGLDAIS 
ARALQKHFYH RYGTTLKALM VEEGVDPHDF LDFAHDIDHS TIKLDEALGT AIEHLPGRKL
ILTNGSRRHA ESVAGKLGIL DHFEDVFDIA DADFIPKPDR GTYERFLLRH GVDPRRSALF
EDIARNLVVP HDLGMATVLV VPPTPDPFRE LFEQEAVQEP HIDHITSDLA AFLVRCVLPV
VPPGPAAP