Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2566 |
Symbol | |
ID | 7117313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 2698666 |
End bp | 2700615 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643525314 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002421336 |
Protein GI | 218530520 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0181477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA TTTACGGCCG CCGAGAGCTC CTGAGCGGTA TCGTACCGAG CTATACCGAC CCGGAAGCCT GCATCCGTCA GATCGGGGAG TTGCAGAAGC AGATCCCGTC GCTCTACGCG CTGCTCTCCG TCAACGCCTG CGCCCTCGCA TTCACCCATT ACCCACTTGC GCCGGCTTGG CTGACCGTCG GGCTGCCCGG CGCGATGATC GGCCTGTGTG TGGTGCGGGC CACGCATTGG TGGCATCTCC GGCCGCAGTC GATCTCCGGA GAAGAGGCCG TCAAACGGCT GCGCGGCACC AGCCTCCTCA CCGTCCTGTT CTCGGCCCTC TTCGTCGGCT GGGCGATGAA GCTCACGTCC TATGGCGGAC CGTTCGAACA GGGTCATGTC GCGATCTTCG TCGCGATCAC CGTCATCGCC TGCATCTTCT GCCTGACGCA TCTGCCGGCC GCGGCGCTCG TCGTGACGAT CATCGTCATG GGCAGCTTCC TGATTCACTG CTTCACGAGC GGCAACAGCG TCTTCATCGC GATCGCGCTG AACACCGCCT TCGTCACGGT GGTGATGGTG CGCATCCTCA CCAACAACTT CCTGGCCTTC CTCCAACTGC TCGAGTCCAA GGCCGAAGCC CAGCGGCTCG GCGAGGAGAA CCAGCGCCTG GCGCATACCG ACAGCCTGAC CGGGTTGCCC AATCGGCGCT ATTTCTTCCA GCGCCTCGAT GCGCTGATCG CCGCCTCGGC GACCGGAAAC GCCGCCTTCG CCCTCGCAAT CTTCGACCTC GACCGGTTCA AGCCGATCAA CGACACGTTC GGCCACACCG CCGGAGACCG GGTGCTGGAA GAGACCGGGC GCCGTCTCAG CGCCTTCGCC GCGGATGGCG TGACGATTGC GCGCCTCGGC GGCGACGAGT TCGGCGTGCT GATCCACGGG GCCGACCGCA CGGCCGACGC GGTCGAGCTT TGCAACCGCA TCTGTACGGC GCTGCAGGCG CCGATTTCGC TCGGCGAGAC CCACGTCGTG CCGGGATGCT CCGGCGGCCT GGCGCTGTAT CCCAGCGCCG GACGGGCCGC GGATGCGCTG TTCGACCGGG CCGATTATGC GCTCTACCAT TCCAAGGAGC GTAAGCGCGG GACCACGACC CTGTTCTCGC AGGAGCATGA GGACGCGATC CGGGCCGAGC GCGCGGTGGA GGCCGCCCTC CAGAGCGCGG ATCTCGCCGC CGAGATGGAG ATGCACTACC AGCCGATCCT CGACACGGTG ACGGACCGCA TCACAACGGT CGAGGCGCTG GCGCGCTGGA CGAGCCCCAA GCTCGGGCGC GTGCCGCCCG ACCGCTTCAT CGCCGTGGCG GAGCGCTGCG GCATGATCCA CTCGGTGACC CTGCTGCTCC TGCGCAAGGC GCTCGCCGAC GCGGCCCGGC TCCCGGACGA CGTCGGATTG TCGTTCAACC TCTCCTCGCA TGATCTCGCC TCGCCCGAGA CGGTCATCGC GATCCTCGCC GCGGTCCGGC AGAGCGGGCT CGATCCCCGG CGGATCACGC TGGAGCTGAC GGAGACCGCG CTGATGCGCG ACTTCGAGGG AGCGCAAAAG GCGATCACGC TCCTGCGCGC ACTCGGCATC AAGATCGCGC TGGACGATTT CGGGACGGGG TATTCGAGCC TGAACTACGT CCACCGCCTG CCGCTGGACC GGATCAAGAT CGACCGCGGC TTCATGGCCG ACGTCGAATC CGACCTCGGG CGCAGCGTCG TGATCACGAT CCTCGATCTC TGCCAGAATC TCGGCCTGGA CGGCATCGCC GAGGGGATCG AGACCACGGA GCAACTGAGC GCGGTGCGCC GTCACGGCTG TCGCTACGTT CAGGGCTACC TGATCGGGGT GCCGATGCCG ATGACGGACC TGCTCGGCGG CCTTCGCGGC GCGGCGGAGG CCGAGCCGGT CTCCGCCTGA
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Protein sequence | MKFIYGRREL LSGIVPSYTD PEACIRQIGE LQKQIPSLYA LLSVNACALA FTHYPLAPAW LTVGLPGAMI GLCVVRATHW WHLRPQSISG EEAVKRLRGT SLLTVLFSAL FVGWAMKLTS YGGPFEQGHV AIFVAITVIA CIFCLTHLPA AALVVTIIVM GSFLIHCFTS GNSVFIAIAL NTAFVTVVMV RILTNNFLAF LQLLESKAEA QRLGEENQRL AHTDSLTGLP NRRYFFQRLD ALIAASATGN AAFALAIFDL DRFKPINDTF GHTAGDRVLE ETGRRLSAFA ADGVTIARLG GDEFGVLIHG ADRTADAVEL CNRICTALQA PISLGETHVV PGCSGGLALY PSAGRAADAL FDRADYALYH SKERKRGTTT LFSQEHEDAI RAERAVEAAL QSADLAAEME MHYQPILDTV TDRITTVEAL ARWTSPKLGR VPPDRFIAVA ERCGMIHSVT LLLLRKALAD AARLPDDVGL SFNLSSHDLA SPETVIAILA AVRQSGLDPR RITLELTETA LMRDFEGAQK AITLLRALGI KIALDDFGTG YSSLNYVHRL PLDRIKIDRG FMADVESDLG RSVVITILDL CQNLGLDGIA EGIETTEQLS AVRRHGCRYV QGYLIGVPMP MTDLLGGLRG AAEAEPVSA
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