Gene Mchl_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2405 
Symbol 
ID7113760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2545650 
End bp2547011 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content72% 
IMG OID643525152 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_002421176 
Protein GI218530360 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.732281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.38185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCACG ATTCCGAACC GCAGCCCGTC ACCGCCACTC CCGGAGGCCC CTTGAACGGG 
TCCCTGAAGC CGCCGGGCGA CAAGTCGATC TCCCACCGGG CGATGATCCT GGGTCTGCTC
GCCATCGGCG AGACGCAGGT CGAGGGGCTT CTGGAGGGCG ACGACGTGCT GCGCACGGCC
GCCGCCGCGA AGGCGCTCGG GGCGCAGATC ACCCGCGAGG GCGAGGGGCG CTGGCGGATC
GTCGGCGTCG GCATCGGCGG GATGCAGGAT CCGGACGGCG TGCTCGATTT CGGAAATGCC
GGCACCGGCT CGCGGCTGAT GATGGGCGTC GTCGGCGGCC AGCCCGTGAC CGCGACTTTC
GACGGCGACG CCAGCCTTCG CAAGCGGCCG ATGCGGCGCA TCCTCGATCC GATCCTGAAG
ATGGGCGCCG AGATCGTGTC CGAGGCCGAG GGGGGGCGCG TGCCGCTGAC CCTGCGGGGT
CCGCGCGAGG CGATTCCGAT CCGCTACGAG CTGCCGGTGG CCTCGGCGCA GATCAAGTCG
GCGGTGCTGC TCGCCGGGCT CAACGCGCCG GGCACCACCA CCGTCATCGA GAAAGCGGCG
TCCCGCGACC ATACCGAGCG GATGCTGCAC CTGTTCGGCG CGGAGGTGAC CGTCACGCCG
TCGGGCGAGG GCGGCCATGG CCGCACCGTC ACGCTGACCG GCCAGCCGAC CCTGCGCGGC
ACCGACGTGG TCGTGCCGGC CGATCCGTCC TCGGCTGCCT TCCCGCTGGT GGCGGCGCTG
ATCGTGCCGG GCTCCGAAGT GATCCTGCGC GGCGTGATGA TGAACCCGCT GCGCACCGGC
CTCATCACCA CACTGATCGA GATGGGCGCC GACATCGAGC GCCTCGACGA GCGCGAGGAG
GGGGGCGAGA CGGTGGCCGA CCTGCGGGTG CGCGCGAGTC GCCTCAAGGG CGTCGATGTG
CCGGCCGAGC GGGCGCCGTC GATGATCGAC GAGTATCCGA TCCTGGCGGT CGCCGCTTCG
TTCGCCGAGG GCACGACCCG GATGAACGGG CTGCACGAAT TGCGGGTCAA GGAATCCGAC
CGGCTCGCGG CGGTCGCCGC CGGACTTGCC GCCAACGGCG TCACCCACGC CATCGAGGGC
GATGACCTGA TCGTGACCGG CAACGGGCAG GCGCCCGCGG GCGGCGGCAC GGTCGCGACC
CATCTCGATC ACCGCATCGC CATGGCCTTC CTCGTCCTGG GGCTCGCTGC CAAAAGCCCC
GTCACCGTGG ACGACGGCGC GATGATCGCC ACGAGCTTCC CGAGCTTCCG CCCGACCATG
CTGGCGCTCG GCGCCCGGAT CGAGGACGGG GCCGCCGCAT GA
 
Protein sequence
MSHDSEPQPV TATPGGPLNG SLKPPGDKSI SHRAMILGLL AIGETQVEGL LEGDDVLRTA 
AAAKALGAQI TREGEGRWRI VGVGIGGMQD PDGVLDFGNA GTGSRLMMGV VGGQPVTATF
DGDASLRKRP MRRILDPILK MGAEIVSEAE GGRVPLTLRG PREAIPIRYE LPVASAQIKS
AVLLAGLNAP GTTTVIEKAA SRDHTERMLH LFGAEVTVTP SGEGGHGRTV TLTGQPTLRG
TDVVVPADPS SAAFPLVAAL IVPGSEVILR GVMMNPLRTG LITTLIEMGA DIERLDEREE
GGETVADLRV RASRLKGVDV PAERAPSMID EYPILAVAAS FAEGTTRMNG LHELRVKESD
RLAAVAAGLA ANGVTHAIEG DDLIVTGNGQ APAGGGTVAT HLDHRIAMAF LVLGLAAKSP
VTVDDGAMIA TSFPSFRPTM LALGARIEDG AAA