Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2317 |
Symbol | |
ID | 7116895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 2437266 |
End bp | 2438714 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643525066 |
Product | Homospermidine synthase |
Protein accession | YP_002421090 |
Protein GI | 218530274 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5310] Homospermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.102013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.442581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATG GCCCGAAGAA GGATTGGCCC GTCCACGGTC GCATCACCGG CCCGATTGTG ATGATCGGTT TCGGGTCGAT CGGCCGGGGC ACCCTGCCCC TCATCGAGCG CCATTTCGAG TACGACAAGA GCCGCTTCAC GGTCATCGAT CCCGTCGACA CCCATAAGGA TCTCGCTGAC AAGCACGGCC TGCGCTTCGA GAAGGTCGCG CTCACCAAGG AGAACTACCG CGACGTCCTC ACCCCGCTCC TCACCGAGGG CGGCGGCCAG GGCTTCTGCG TGAACCTGTC GGTGGACACC TCCTCGCGCG ACATCCTCGA ACTCTGCCGC GAACTCGGCG CGCTCTACAT CGACACGGTC GCCGAGCCGT GGACCGGCTT CTACTTCGAC AAGGACCTGA GCCAGGCCGA CCGCACCAAC TACGCGCTGC GCGAGAACAT CCTCGCCGCC CGCCGCGCCG CGCCCGGCGG CACGACCGCG GTTTCGTGCT GCGGCGCAAA CCCCGGCATG GTCTCATGGT TCGTCAAGCA GGCGCTGCTC AACGTCGCCA AGGACACCGG CTCCTCGACC CCTGAGCCGA AGTCCCGCGA GGAATGGGCC GCGCTCATGC GCGAACTCGG CGTCAAGGGC ATCCACATCG CCGAGCGCGA CACCCAGCGC GCCAAGAACC CCAAGCCGCA GGGCGTGTTC GTCAACACCT GGTCGGTCGA GGGCTTCGTC TCCGAGGGCA ACCAGCCGGC CGAGCTCGGC TGGGGCACGC ACGAGACCTG GAAGCCCGCC AATACCCAGG AGCAGACCAA GGGCTCGCGC TGCGCAATCT TCCTGCTCCA GCCCGGCGCC GACACCCGCG TGCGCTCCTG GACCCCGACC GCGCAAGCGC AGTTCGGCTT CCTCGTGACC CACAACGAGG CGATCTCGAT CGCGGACTAC TACACGGTCC GCGAGGGTAA CGAGGCGGTC TACCGTCCGA CCTGCCACTA CGCCTACCAC CCGGCCAACG ACGCCGTGCT CTCGCTGCAC GAGATGTGGG GCAATGCCGG CAAGGTGCAG GAGCACCAGC ACATCCTCGA CGAGAACGAG ATCGTTGACG GCATCGACGA ACTCGGCGTC CTCCTCTACG GGCACAAGAA GAACGCCTAC TGGTACGGCT CGCAGCTCTC CATCGAGGAG ACCCGGCGGA TCGCCCCCTA CCAGAACGCG ACCGGCCTTC AGGTGACGAG CGCCGTGCTC GCGGGCATGG TCTGGGCCCT GGAGAACCCG GAGGCCGGCA TCGTCGAGGC CGACGAGATC GACTTCCGCC GCTGCCTGGA AGTGCAGACG CCGTATCTCG GTCCCGTCGT GGGCGTGTAC ACCGACTGGA CCCCGCTCAC CGACCGTCCG GGCCTGTTCC CGGAGGACAT CGACCCGAGC GACCCCTGGC AGTTCCGCAA CGTGCTCGTG CACGGCTGA
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Protein sequence | MSDGPKKDWP VHGRITGPIV MIGFGSIGRG TLPLIERHFE YDKSRFTVID PVDTHKDLAD KHGLRFEKVA LTKENYRDVL TPLLTEGGGQ GFCVNLSVDT SSRDILELCR ELGALYIDTV AEPWTGFYFD KDLSQADRTN YALRENILAA RRAAPGGTTA VSCCGANPGM VSWFVKQALL NVAKDTGSST PEPKSREEWA ALMRELGVKG IHIAERDTQR AKNPKPQGVF VNTWSVEGFV SEGNQPAELG WGTHETWKPA NTQEQTKGSR CAIFLLQPGA DTRVRSWTPT AQAQFGFLVT HNEAISIADY YTVREGNEAV YRPTCHYAYH PANDAVLSLH EMWGNAGKVQ EHQHILDENE IVDGIDELGV LLYGHKKNAY WYGSQLSIEE TRRIAPYQNA TGLQVTSAVL AGMVWALENP EAGIVEADEI DFRRCLEVQT PYLGPVVGVY TDWTPLTDRP GLFPEDIDPS DPWQFRNVLV HG
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