| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2307 |
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| Symbol | |
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| ID | 7116885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 2426362 |
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| End bp | 2429514 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643525057 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002421081 |
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| Protein GI | 218530265 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.091936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCG CTCTACCCGC CCGCATCGGT CCAAGCGAGG CCGCTACAGC CGATCCCAAC
TTGTTTTGGC CGCAAAGCCA CGCGATCCGC GTCGCACGGT CCGCCGAAAG AGCGGTGGGC
GGGCCGCGCG TCCCGGCTGG CTTGCCTTGC GGGGGCCGGA AGCCGCCGAT ACGACTTGGC
CGCTCGCCCC CACCGCTCAA GCCGGTTGTC AAGAATCGCC CGTTGCGCAC GCTTTCACTG
GCCCTTGCCC TCGCCCTCGC GATCCTGACG GCCGTGGCGG GCTCCCTCGC CGGCCTGATC
GGGACCGCCG CCCCCGCCCA TGCGGTCGAG GCCGTGCGCG TCACCCTCGA CGCGCCCGCC
ATCGACCTGA CGCCGACGAT CGAGCGCTAC CGCTCGGACG GCGACCTGAT CCAGATCTCC
ACCGCTCCGG GCAAGGACGG CATCGTGCGG CGCATCGCGG TCAAAGCGCG CGAGGCGGGC
GCGCGGCCGG ACTGGATGGT GTTCGCGCTC ACCAACGACA CCGACGAGCA GATCGACCGC
CTGCTGGTCG CCCCGCATTT CCGCCTCGTC GGCTCCGGGG TGATCTGGCC CGATCTCGGC
GGCTCGCGCA TCGCCGCGAT CACCGCGAGC GAGGGCATCC GGCCCGAGCG CGACGAGAGC
CTCGACGCCG ACCAGTTCCT GATCACCATC GATCCCGGCA CCACAGTCAC CTACGTGGCG
GAGCTGAAAG GCCCGAACAT CCCGCAGGTC TACCTCTGGG ATCAGGACGC CTACCGCAAG
AAGACCTCGG GGCTGACGCT CTACAAGGGC ATCATCATCG GCATTGCCGG GCTCTTGGCG
CTGTTCCTCA CCATCATCTT CGTGGTGAAG GGCGCGATCA TCTTCCCCGC CGCAGCCGCG
CTCTCCTGGG CGGTGCTGGC CTATGCCTGC ATCGATTTCG GCTTCCTGCA GCGGGTGTTT
CCCGTCACCG AACTTGCCGA GCGGATCTAC CGCGCCTCGG CCGAGGCCGT GCTCGGCGCG
ACCCTGCTAG TGTTCCTGTT CGCCTACCTG AACCTGTCGC GCTGGCACGT GCGCTACAGC
CACGTCGCCT TCTTCTGGCT CACCTTCCTC GCCGGCCTCG TGGCGCTGGC GGTGTTCGAC
CCGCCCGTGG CGGCGGGCGT GGCGCGCATT TCCATCGCTG CCGTGGCCGG CGTCGGGCTC
CTGCTGATCC TCTATCTCGC CGTCCATAAC GGCTACGACC GCGCCATCCT GCTGGTGCCG
ACCTGGCTGC TGCTGCTGGT CTGGGTGGTG GCGGCGGGCT TTGCCATCAC CGGGCAGATC
GGCTCCGACC TCGTGCAGCC GGCGCTCATC GGCGGCCTCG TGCTCATCGT CATGCTGATC
GGCTTCACGG TGATGCAGCA CGCCTTCGCC GGCGGCGGCC TCAGCCACAG TCTCGTCTCG
GACACCGAGC GCCGGGCGCT GGCGCTGACC GGCGCGGGCG ACATCGTCTT CGACTGGGAC
GTGCCGGGTG ACCGTGTCTT CGCCGGCCCC GAGATCGAGG CCCAGCTCGG GCTCAAGCGC
GGCGCCCTCG AAGGGCCGGC GGCGAACTGG CTCGGCCTGC TCCATCCCTT CGACGTGGAG
CGCTACTCGG CCGCCCTCGA CACCGTGATC GAGGAGCGGC GCGGCCGCAT CACCCACGAT
TTCCGCCTGC GCTCGGCCGA TGGCCCCTAC GCGTGGTACC GGCTGAAGGC GCGGCCGGTG
ATCGGCACCG ATGGCGAGGT GATCCGCATC GTCGGCACGA TCAGCGACGT GACCGAGGCG
AAGACCGCCG AGGAGCGGCT GCTGCACGAC GCGGTGCACG ACAGCCTCAC CGGCCTGCCG
AACCGCGAGC TGTTCCACGA CCGGCTGGAG GCCGCGCTGG CGATGGCGAG CCAGGATCCG
CGCCTCAAGC CCGCGGTGAT CGCCCTCGAC ATCGACCGGT TCAAGGCGAT CAACGACGCC
ATCGGCCTCT CGGCGGGCGA CTCGATCCTG CTGACGCTCT CGCGCCGGCT CGGGCGGCTG
CTGCGGCCGC AGGATACGCT GGCGCGGGTC GCGGGCGACG AATTCGCGGT GATCCTGCTC
TCGGAGCGCG AGCCCGACCG CATCCTCTCG TTCGCCGAGA TGATCCGGCG CGCCATCGCC
ACCCCGGTCA CCTATGCCGA CCGCGAGGTG TTCCTCACCG TCTCCATCGG CATCGCGCTG
CACGAGGCCA CGCAAGGCGT GGGCAACCAG GGCAGCGGGC AGACGCGGCG CGAGGAGGTG
TTCAAGAACG CCGAGATGGC GATGATCCAG GCCAAGCGCG GCGGCGGCGA CCGGATCGAG
GTGTTCCGCG CCAACATGCG CCTCGAGCGC TCCGACCGGC TGATGCTGGA GGCGGATCTG
CGCAAGGCGT TGGAGCGCAA CGAGATCAAG GTGCTGTTCC AGCCGATCGT CCGGCTCGAA
GACCGCACCG TCGCCGGCTT CGAGACGCTG CTGCGCTGGG ATCATCCGAA GCTCGGGCGC
ATCCCGCCCT CCACCTTCCT CCCGGTGGCG GAAGAGACCG GCGTCATCGT CCCGCTCGGC
AATTTCGCCA TCGAGCGCAC GGCGCTGGAA CTCGCCGCCT GGCAGCGCTC GCTCGACGTC
GAACCGCCGA TCTTCGCCTC GGTCAACGTC TCCTCGCGCC AGCTCCTGCG CCACGACCTC
CTGCACGACG TGAAGACGGT GATCGCCCGC ACCGGCGTGC TGCCCGGCTC GCTCAAGCTG
GAGATGGCCG AGGGGCTGGT GATGGAGAAC CCGGAATACG CCGCCCAGAT GCTCACCCGC
ATCCACGATC TCGGCGCCGG CCTCGTCCTC GACGATTTCG GCACCGGCTA CTCGGCGATC
TCCTATCTCC AGCGCTTCCC CTTCGACACG ATCAAGATCG ACCAGAGCTT CGTGCGCCAG
ATGGGCCAGG GCCGCACCGC CATGCTGCGC TCGGTTCTGC GGATGGGGCA GGAACTTGGT
CTGGCCACCA TCGCCGAGGG CGCCGAATCG GAGGAGGATG CGCAGGTGTT GCAGGAATTC
GGCTGCGATT ACGCGCAAGG GGCGGCCTTC GGCGAGCCGA TGACCGTGCT CCAGGCGCGC
CAGCTCGTCG GCGCCGCGCC CGAAGCGGCC TGA
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| Protein sequence | MVTALPARIG PSEAATADPN LFWPQSHAIR VARSAERAVG GPRVPAGLPC GGRKPPIRLG
RSPPPLKPVV KNRPLRTLSL ALALALAILT AVAGSLAGLI GTAAPAHAVE AVRVTLDAPA
IDLTPTIERY RSDGDLIQIS TAPGKDGIVR RIAVKAREAG ARPDWMVFAL TNDTDEQIDR
LLVAPHFRLV GSGVIWPDLG GSRIAAITAS EGIRPERDES LDADQFLITI DPGTTVTYVA
ELKGPNIPQV YLWDQDAYRK KTSGLTLYKG IIIGIAGLLA LFLTIIFVVK GAIIFPAAAA
LSWAVLAYAC IDFGFLQRVF PVTELAERIY RASAEAVLGA TLLVFLFAYL NLSRWHVRYS
HVAFFWLTFL AGLVALAVFD PPVAAGVARI SIAAVAGVGL LLILYLAVHN GYDRAILLVP
TWLLLLVWVV AAGFAITGQI GSDLVQPALI GGLVLIVMLI GFTVMQHAFA GGGLSHSLVS
DTERRALALT GAGDIVFDWD VPGDRVFAGP EIEAQLGLKR GALEGPAANW LGLLHPFDVE
RYSAALDTVI EERRGRITHD FRLRSADGPY AWYRLKARPV IGTDGEVIRI VGTISDVTEA
KTAEERLLHD AVHDSLTGLP NRELFHDRLE AALAMASQDP RLKPAVIALD IDRFKAINDA
IGLSAGDSIL LTLSRRLGRL LRPQDTLARV AGDEFAVILL SEREPDRILS FAEMIRRAIA
TPVTYADREV FLTVSIGIAL HEATQGVGNQ GSGQTRREEV FKNAEMAMIQ AKRGGGDRIE
VFRANMRLER SDRLMLEADL RKALERNEIK VLFQPIVRLE DRTVAGFETL LRWDHPKLGR
IPPSTFLPVA EETGVIVPLG NFAIERTALE LAAWQRSLDV EPPIFASVNV SSRQLLRHDL
LHDVKTVIAR TGVLPGSLKL EMAEGLVMEN PEYAAQMLTR IHDLGAGLVL DDFGTGYSAI
SYLQRFPFDT IKIDQSFVRQ MGQGRTAMLR SVLRMGQELG LATIAEGAES EEDAQVLQEF
GCDYAQGAAF GEPMTVLQAR QLVGAAPEAA
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