Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_2294 |
Symbol | |
ID | 7114851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 2409182 |
End bp | 2411239 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643525044 |
Product | carbon starvation protein CstA |
Protein accession | YP_002421068 |
Protein GI | 218530252 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.011541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGCAA TACAGAAGCA TGGGCCCTGG GCCCTGGTCG GGGCATTGGG CGCTGCGTCG CTGGCGGTGG TCGCCACGCA ACGGGGCGAA TCGATCAACG CCCTATGGGT CGTGGTCGCC GCAGTCTGCG TCTACCTGAT CGCCTACCGC TACTATTCCC TTTTCATCGC CGACAAGGTG ATGCGTCTCG ATCCGAAGCG CGAGACCCCG GCCCACCGTC ACAACGACGG CCTCGACTAT GTTCCCACCA ACAAATCGGT CCTGTTCGGC CACCACTTCG CGGCCATCGC CGGCGCCGGA CCGTTGGTCG GCCCGGTGCT CGCGGCTCAG ATGGGCTACC TGCCCGGCAT GCTCTGGATC CTCGCCGGCG TCGTGCTCGC GGGCGCGGTG CAGGATTTCA TGATCCTGTT CATCTCGATG CGCCGCGATG GGCGCTCGCT GGGCGAGCTG ATCCGGGCCG AGCTCGGGGT GATCCCCGGC GTGATCGCCC TGTTCGGCAC CTTCATGATC ATGGTCATTC TGCTCGCCGT GCTGGCGATG ATCGTGGTGA AGGCACTGGC CGAGAGCCCC TGGGGCACCT TCACCGTCGG CGCGACGATC CCGATCGCGA TCCTGATGGG CCTCTACGCG CGCTACATCC GGCCGGGCAA GATCGGCGAG GTGTCGATCA TCGGCTTCGT CCTGCTCATG GCCGCGATCG TCGGCGGCGG TCAGATCAAC GAACACCCCA CCTGGGGTCC TGCCTTCACC TTCACCGGCA CCCAGCTCAC GTGGATGTTG ATCGGCTACG GCTTCGTCGC CGCGATCCTG CCGGTGTGGC TGCTGCTCGC CCCGCGTGAC TACCTGTCGA CCTTCCTCAA GATCGGCACC ATCATCGGCC TCGCGCTCGG CATCGTCGTC GTCGCCCCGC ACATGCAGAT GCCCGCCACG ACGAAGTTCA TCGATGGCAC CGGCCCGGTC TGGGCGGGCT CGCTGTTTCC GTTCCTGTTC ATCACCATCG CCTGCGGCGC CGTCTCGGGC TTCCACGCAC TGATCTCGTC GGGAACGACC CCGAAGCTCG TCAACAACGA GATGGACACC CGCTTCATCG GCTACGGCGG CATGCTGATG GAAAGCTTCG TGGCGATCAT GGCGCTGGTG GCCGCCAGCG TGATCGACCC GGGCATCTAC TTCACCATGA ACTCCCCGGG CGCCCTGCTG GGCAGCACGC CGGAAACCGC CGCCGCTGCG GTGACGGCGC TCGGCTTCCC GATCGGTCCG GACGTCATCG CCCAGACCGC CAAGGATGTC GGCGAGCACT CGATCATCTC GCGCGTCGGC GGCGCGCCGA CCCTCGCGGT CGGCATGGCG CACATCATCT CCTCGGCCAT CGGCGGCAAG GCGATGATGG CCTTCTGGTA TCACTTCGCG ATCCTGTTCG AGGCCCTGTT CATCCTGACC GCGGTGGATG CGGGCACGCG CGCCGGCCGC TTCATGCTGC AGGATCTGCT CGGCCTGCTC TCGCCGCGCT TCAAGGACAC CTCGGCCTGG GGTCCGAGCG TGGTCGCCAC CGCCCTGTGC GTCAGCGCCT GGGGCTACTT CCTCTACCAG GGCGTCACCG ATCCGCTCGG CGGCATCTAC ACCCTGTGGC CGCTGTTCGG CATCTCGAAC CAGATGCTGG CCGCCGTCGC GCTGACGCTG GCAACCGTCG TGATCTTCAA GATGAAGCGC GAGCGCTATG CCTTCGTCAC GATCATCCCG ACCGTCTGGC TGTGCATCTG CACCCTGACC GCCGGCTGGC AGAAGATCTT CTCGCCCGAC CCGAAGATCG GCTTCCTCTC GCACGCCGAC CGCTTCTCGG CGGCGATCGC GGAAGGCAAG GTGCTCGGCC CGGCCAAGAG CATGGCGGAC ATGCACAAGA TCGTCTTCAA CGACCGCATC GACGCGGCTC TGGCCGTGTT CTTCGTCGGC CTCGTCGTGG CGATCGCGGT GTTCGGCGTC ATGGCCTGCG TCAAGGCCTA CCGTGCCGAT CGCTGGACGG CGCTGGAAGC CGATCCCCGA CTCGCCCCGG CGGAGTGA
|
Protein sequence | MGAIQKHGPW ALVGALGAAS LAVVATQRGE SINALWVVVA AVCVYLIAYR YYSLFIADKV MRLDPKRETP AHRHNDGLDY VPTNKSVLFG HHFAAIAGAG PLVGPVLAAQ MGYLPGMLWI LAGVVLAGAV QDFMILFISM RRDGRSLGEL IRAELGVIPG VIALFGTFMI MVILLAVLAM IVVKALAESP WGTFTVGATI PIAILMGLYA RYIRPGKIGE VSIIGFVLLM AAIVGGGQIN EHPTWGPAFT FTGTQLTWML IGYGFVAAIL PVWLLLAPRD YLSTFLKIGT IIGLALGIVV VAPHMQMPAT TKFIDGTGPV WAGSLFPFLF ITIACGAVSG FHALISSGTT PKLVNNEMDT RFIGYGGMLM ESFVAIMALV AASVIDPGIY FTMNSPGALL GSTPETAAAA VTALGFPIGP DVIAQTAKDV GEHSIISRVG GAPTLAVGMA HIISSAIGGK AMMAFWYHFA ILFEALFILT AVDAGTRAGR FMLQDLLGLL SPRFKDTSAW GPSVVATALC VSAWGYFLYQ GVTDPLGGIY TLWPLFGISN QMLAAVALTL ATVVIFKMKR ERYAFVTIIP TVWLCICTLT AGWQKIFSPD PKIGFLSHAD RFSAAIAEGK VLGPAKSMAD MHKIVFNDRI DAALAVFFVG LVVAIAVFGV MACVKAYRAD RWTALEADPR LAPAE
|
| |