Gene Mchl_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2083 
Symbol 
ID7115867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2183618 
End bp2184748 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content70% 
IMG OID643524833 
Productdiguanylate phosphodiesterase 
Protein accessionYP_002420858 
Protein GI218530042 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000567834 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGAAGCG AGCCCGCTGT TTCGGCGCAG CGCCTGCATC GTGCGGAAGA CAGGCCGTGC 
ATCGAGCCGG TCCAGCTCTC GGGCGTGGCC GGTGTGACGG CGCCGCGTCT CGACCTGGAG
CGCTCCGCGA CAGGAAGCGG GGGCGCTCCC CGGGTCCCGG CTCGCATCAA GGATCTGAAA
GCCAAGGATC TGAAGGCCAA GGATTTCCGG GCGGCCCTGG CCGGGGGGGA GTTTTCGCTC
GCCTACCAGC CGATCGTGTC GGCGGCGACG GGGGCGATCA CCGGTTGCGA GGCGTTGCTG
CGCTGGCAGC ACCCGTTCCT GGGGCCGGTA TCACCGGCCG ACTTCGTCCC CCTGGCCGAG
GAGACGGGAG CGATCCGCCC GATCGGAGCC TGGGTTCTCG AAGCCGCCTG CCGGCAGGCG
GCGGTCTGGC CGGACTTCTG CCGAGTCTCG GTGAACGTCT CCCCGGTTCA ACTGCAGGAT
CCGGGCTTCG CGGACCGGGT CGTCGCCGCG TTGCGGGCCA GCGGACTGGC GGCGGGCCGG
CTCGAACTGG AGCTGACCGA AGGGGTCTTG ATGGGTGACG TCGCCGTCGC GCTCGAGGGC
GTCGCGGCCC TCCGTGCCCT CGGCGTCAGC ATCGCCCTCG ACGATTTCGG CACCGGCTTC
TCGTCGCTCG GCTACCTGCA GCGCTTCGCC TTCGACAGGC TCAAGATCGA TCGCACGTTC
ATCAGAGGCC TCGGCGAAGC GCGCGAGAGC TGGTTCCTGG TCCGGACCGA TGCACGACAT
CGCCCGTCAT TTCGGGATGG CGGTGACCGC CGAGGGGATC GAGACCGAGG ACGAAGCCCG
GATGCTTCGC GAGATCGGCG CCACGGAGCT GCAGGGCTTC CTGTTCAGCC GGCCCGTCGC
GGGCGCGGTC GCGACGGCGC TCCTGAGCGA GCAGGCGCAC AGACTGCGAT CGGGCGAGGC
CGGACCACCC GCGAAATCGT CGGATCACCC GGTCCCATGA TGCGCCCTGC CGCCCAGCTC
CCGCGGCCGG GACAACCGGG ATCGGCTCCG GACCGCTGTT CCGATGGGCC TTTCGCCGAA
CGGGCAATCC GCTCCGAGGC AGGAGCGCTC CCACGCGCGG GTCATCCGTA A
 
Protein sequence
MRSEPAVSAQ RLHRAEDRPC IEPVQLSGVA GVTAPRLDLE RSATGSGGAP RVPARIKDLK 
AKDLKAKDFR AALAGGEFSL AYQPIVSAAT GAITGCEALL RWQHPFLGPV SPADFVPLAE
ETGAIRPIGA WVLEAACRQA AVWPDFCRVS VNVSPVQLQD PGFADRVVAA LRASGLAAGR
LELELTEGVL MGDVAVALEG VAALRALGVS IALDDFGTGF SSLGYLQRFA FDRLKIDRTF
IRGLGEARES WFLVRTDARH RPSFRDGGDR RGDRDRGRSP DASRDRRHGA AGLPVQPARR
GRGRDGAPER AGAQTAIGRG RTTREIVGSP GPMMRPAAQL PRPGQPGSAP DRCSDGPFAE
RAIRSEAGAL PRAGHP