Gene Mchl_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2054 
Symbol 
ID7118754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2153222 
End bp2154004 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content74% 
IMG OID643524804 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002420829 
Protein GI218530013 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR03611] pyrimidine utilization protein D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.198896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC CCGTCCATCA CGAAGTGCAC GGGCCAGCCG GCGGGCGCAC CGTGCTGCTC 
TCGCCCGGGC TCGGCGGCTC GGCCCATTAC TTCGCGCCGC AAGTGCCGGT GCTGGCCGAG
CGCTTCCGGG TCGTCACCTA CGATCACCGC GGCACCGGGC GCTCCCCCAG CCCGCTCGAA
CCGGGCCACG ACATCGCGGC GATGGCCCGC GACGTCCTCG CCCTGCTCGA TCATCTCGGC
ATCGGCACGG CCGACATCGT CGGCCACGCG CTGGGCGGCC TCATCGCCCT GCAACTCGCC
CTCACCCATC CCGAGCGGGT CGGGCGGATC GTGGTGATCA ACGGCTGGGC GGCAATGGAC
CCGGCGACGC GCCGCTGCTT TGCCGCCCGC AAGGCGCTGC TCCGGCATGC CGGGCCCGAA
GCGTTCGTCC GCGCCCAAGC GATCTTCCTC TACCCGGCGC CCTGGCTCTC CGAGAACGCC
GCGCGGGTCG CGGCCGACGA GGCGCAGGCG CTGGCGCATT TCCCGGGCAC GCGGACGGCG
CTGGCCCGCA TCACCGCCCT GGAAACCTTC GACGCGACCG CCGCACTCGG GCGCATCCCG
CACGAGACCC TGCTCATGGC CGCGCGCGAC GACGTGCTCG TGCCCTTCAC CGCCTCGGAC
GTGCTCGCGG CCGGGCTCCC CAACGCCCGC CTCGATCTCG CGCCCGAGGG TGGCCACGCC
CACAGCGTCA CCCGACCCGA AGCCTTCAAC CGCACGCTCC TCGACTTCCT CGCAAGTCCC
TGA
 
Protein sequence
MAAPVHHEVH GPAGGRTVLL SPGLGGSAHY FAPQVPVLAE RFRVVTYDHR GTGRSPSPLE 
PGHDIAAMAR DVLALLDHLG IGTADIVGHA LGGLIALQLA LTHPERVGRI VVINGWAAMD
PATRRCFAAR KALLRHAGPE AFVRAQAIFL YPAPWLSENA ARVAADEAQA LAHFPGTRTA
LARITALETF DATAALGRIP HETLLMAARD DVLVPFTASD VLAAGLPNAR LDLAPEGGHA
HSVTRPEAFN RTLLDFLASP